Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 43.38 | 56.21 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 37.44 | 40.0 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 15.98 | 38.89 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 36.07 | 34.96 |
| GSMUA_Achr11P... | Banana | nucleus | 37.44 | 34.6 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 34.7 | 33.93 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 54.34 | 33.52 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 16.44 | 33.03 |
| PGSC0003DMT400038366 | Potato | nucleus | 38.81 | 32.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.86 | 32.92 |
| Solyc08g076400.2.1 | Tomato | nucleus | 39.27 | 32.7 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 39.73 | 32.34 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 37.9 | 31.68 |
| GSMUA_Achr10P... | Banana | nucleus | 30.14 | 31.58 |
| GSMUA_Achr10P... | Banana | nucleus | 38.36 | 30.22 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 34.7 | 27.94 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 31.51 | 27.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.27 | 27.48 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 42.92 | 26.55 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 33.33 | 26.45 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 45.21 | 26.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.73 | 25.44 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 40.64 | 23.73 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 42.92 | 22.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.18 | 22.22 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 16.89 | 17.96 |
| GSMUA_Achr11P... | Banana | nucleus | 19.18 | 17.95 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 17.81 | 15.73 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 20.09 | 15.07 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 19.63 | 15.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.63 | 14.58 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 20.55 | 13.55 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 20.55 | 11.9 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 21.46 | 11.46 |
| GSMUA_Achr10P... | Banana | nucleus | 21.92 | 9.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G22100_001 |
| EnsemblPlants:GSMUA_Achr1P22100_001 | EnsemblPlants:GSMUA_Achr1T22100_001 | InterPro:Homeobox-like_sf | UniProt:M0S218 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000295F0A5 | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G22100_001]
Coordinates
chr1:+:16623594..16625154
Molecular Weight (calculated)
23519.8 Da
IEP (calculated)
9.189
GRAVY (calculated)
-0.398
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLKGESTGT SSTASPDLSL TIGLPGVVSS GTSGDDGRYR ACIDLSLACA MSSSEANVFQ RFQGPLSSPT PINGAPIYPK SGLQHQMSSS SCNGYPNEAY
101: LMSSYLHWSN EYFPCGVGSL EATQSLMRSR STPRYPTKRS TIRAPRMRWT SSLHAHFVHA IELLGGHERA TPKSILELMA VKDLTLAHVK SHLQMYRTTK
201: STDKPAASSG NPCSSSSTN
101: LMSSYLHWSN EYFPCGVGSL EATQSLMRSR STPRYPTKRS TIRAPRMRWT SSLHAHFVHA IELLGGHERA TPKSILELMA VKDLTLAHVK SHLQMYRTTK
201: STDKPAASSG NPCSSSSTN
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.