Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P00310_001 | Banana | nucleus | 10.05 | 42.22 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 11.64 | 40.37 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 24.07 | 37.6 |
| PGSC0003DMT400011207 | Potato | nucleus | 21.16 | 33.76 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 35.45 | 32.68 |
| AT2G42660.1 | Thale cress | nucleus | 21.43 | 31.76 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 13.23 | 29.59 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 23.02 | 28.34 |
| GSMUA_Achr11P... | Banana | nucleus | 16.4 | 26.5 |
| KRH21258 | Soybean | nucleus | 25.4 | 25.74 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 22.49 | 25.6 |
| KRH11029 | Soybean | nucleus | 24.6 | 25.48 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 16.67 | 25.4 |
| KRH27060 | Soybean | nucleus | 24.34 | 25.0 |
| Solyc02g076670.2.1 | Tomato | nucleus | 21.96 | 24.56 |
| GSMUA_Achr10P... | Banana | nucleus | 33.6 | 24.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.05 | 24.41 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 13.23 | 24.39 |
| Os06t0543200-01 | Rice | nucleus | 34.92 | 24.31 |
| PGSC0003DMT400026419 | Potato | nucleus | 22.22 | 24.14 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 14.29 | 24.11 |
| KRH42874 | Soybean | nucleus | 25.4 | 23.88 |
| CDY67147 | Canola | nucleus | 20.63 | 23.85 |
| KRH58975 | Soybean | nucleus | 25.13 | 23.69 |
| OQU76531 | Sorghum | nucleus | 32.01 | 23.63 |
| TraesCS6D01G098200.1 | Wheat | nucleus | 29.63 | 23.58 |
| KRH22274 | Soybean | nucleus | 23.02 | 23.58 |
| CDY42825 | Canola | nucleus | 20.37 | 23.55 |
| TraesCS6A01G109700.1 | Wheat | nucleus | 29.63 | 23.48 |
| Zm00001d046174_P001 | Maize | nucleus | 32.28 | 22.98 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 12.43 | 22.82 |
| EES04827 | Sorghum | nucleus | 32.01 | 22.79 |
| Zm00001d016175_P001 | Maize | nucleus | 32.54 | 22.78 |
| HORVU6Hr1G019650.5 | Barley | nucleus | 28.84 | 22.71 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 30.95 | 22.63 |
| Os02t0241200-00 | Rice | nucleus | 32.28 | 22.39 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 16.93 | 22.38 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 30.95 | 22.33 |
| GSMUA_Achr11P... | Banana | nucleus | 13.76 | 21.94 |
| TraesCS7D01G334100.1 | Wheat | nucleus | 29.89 | 21.86 |
| Zm00001d037015_P001 | Maize | nucleus | 32.01 | 21.84 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 12.7 | 21.24 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 16.4 | 21.23 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 28.57 | 21.14 |
| GSMUA_Achr10P... | Banana | nucleus | 11.64 | 21.05 |
| TraesCS6B01G138200.1 | Wheat | nucleus | 29.37 | 21.02 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 11.9 | 20.55 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 13.49 | 20.32 |
| GSMUA_Achr10P... | Banana | nucleus | 14.81 | 20.14 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 14.02 | 19.7 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 14.02 | 19.49 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 13.23 | 19.08 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 13.49 | 18.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.61 | 17.25 |
| Bra000270.1-P | Field mustard | nucleus | 12.96 | 17.01 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 15.34 | 16.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.02 | 16.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.23 | 15.97 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 15.61 | 15.65 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 14.29 | 15.21 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 15.87 | 14.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.55 | 13.89 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 13.76 | 13.87 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr7G09370_001 |
| EnsemblPlants:GSMUA_Achr7P09370_001 | EnsemblPlants:GSMUA_Achr7T09370_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0TG25 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF20 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000296C9AA | SEG:seg | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G09370_001]
Coordinates
chr7:-:7678324..7680026
Molecular Weight (calculated)
41550.1 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.714
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAVEAAAV DVCGDEEKSE ERSTRSCRSA THKRRLDELD LNEGVGSDGG SGDDDDDDDG GSVTEVAGGA SSSNNSSSSN NDSGSNCDTK SGSPAEGVDQ
101: IRMPTVRQYN RSKLPRLRWT PDLHISFVHA VDRLGGPDRA TPKLVLQVMN VRGLNIAHVK SHLQMYRSKK LDNAWQDKSP FFSAVSPMDA YLRRGLHEMS
201: YQRTAASSYQ SSGMENSGYF QWSPQETDRF YSLMQRLKPF DLKTGNYGYT TRILLMSVIL PSSSSSQTLI PKGSVVLFHP HSRSQDQGLF FGEDGKPSSS
301: QLFDARNPRS RHHYLQGIME GSRSGKFDGI GSSSLRPFST STAPVPGWKN SSNSYSLKDN MSSLHDPIIV DDRLEVPC
101: IRMPTVRQYN RSKLPRLRWT PDLHISFVHA VDRLGGPDRA TPKLVLQVMN VRGLNIAHVK SHLQMYRSKK LDNAWQDKSP FFSAVSPMDA YLRRGLHEMS
201: YQRTAASSYQ SSGMENSGYF QWSPQETDRF YSLMQRLKPF DLKTGNYGYT TRILLMSVIL PSSSSSQTLI PKGSVVLFHP HSRSQDQGLF FGEDGKPSSS
301: QLFDARNPRS RHHYLQGIME GSRSGKFDGI GSSSLRPFST STAPVPGWKN SSNSYSLKDN MSSLHDPIIV DDRLEVPC
001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.