Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G238000.1 | Wheat | nucleus | 96.13 | 94.85 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 89.94 | 91.0 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 82.4 | 82.4 |
| Os06t0543200-01 | Rice | nucleus | 65.18 | 62.06 |
| OQU76531 | Sorghum | nucleus | 58.41 | 58.98 |
| Zm00001d046174_P001 | Maize | nucleus | 55.13 | 53.67 |
| Zm00001d037015_P001 | Maize | nucleus | 55.32 | 51.62 |
| TraesCS6D01G098200.1 | Wheat | nucleus | 37.33 | 40.63 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 16.25 | 34.71 |
| PGSC0003DMT400011207 | Potato | nucleus | 14.51 | 31.65 |
| AT2G42660.1 | Thale cress | nucleus | 15.47 | 31.37 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 21.86 | 29.89 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 17.41 | 29.32 |
| CDY42825 | Canola | nucleus | 18.38 | 29.05 |
| TraesCS5D01G158300.1 | Wheat | nucleus | 17.99 | 28.7 |
| CDY67147 | Canola | nucleus | 17.99 | 28.44 |
| KRH11029 | Soybean | nucleus | 19.73 | 27.95 |
| TraesCS7D01G457400.1 | Wheat | nucleus | 13.54 | 27.89 |
| KRH21258 | Soybean | nucleus | 19.92 | 27.61 |
| TraesCS7D01G457300.1 | Wheat | nucleus | 13.35 | 27.6 |
| PGSC0003DMT400026419 | Potato | nucleus | 18.57 | 27.59 |
| Solyc02g076670.2.1 | Tomato | nucleus | 17.6 | 26.92 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 12.77 | 26.72 |
| KRH27060 | Soybean | nucleus | 18.38 | 25.82 |
| TraesCS4D01G131500.1 | Wheat | nucleus | 17.02 | 25.81 |
| TraesCS2D01G400100.2 | Wheat | mitochondrion, nucleus | 14.51 | 25.68 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 12.19 | 25.61 |
| KRH22274 | Soybean | nucleus | 17.99 | 25.2 |
| KRH42874 | Soybean | nucleus | 18.96 | 24.38 |
| KRH58975 | Soybean | nucleus | 18.76 | 24.19 |
| Bra000270.1-P | Field mustard | nucleus | 12.19 | 21.88 |
| TraesCS6D01G236000.1 | Wheat | mitochondrion | 12.77 | 21.71 |
| TraesCS1D01G205800.1 | Wheat | nucleus | 14.51 | 21.31 |
| TraesCS7D01G294400.1 | Wheat | nucleus | 12.38 | 18.44 |
| TraesCS6D01G011600.1 | Wheat | nucleus | 11.8 | 18.37 |
| TraesCS4D01G320400.1 | Wheat | nucleus | 14.89 | 17.95 |
| TraesCS5D01G075600.1 | Wheat | nucleus | 11.61 | 17.49 |
| TraesCS4D01G071300.1 | Wheat | nucleus | 11.99 | 16.71 |
| TraesCS5D01G412800.1 | Wheat | mitochondrion, plastid | 11.99 | 16.45 |
| TraesCS6D01G248300.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 11.03 | 15.97 |
| TraesCS5D01G209600.1 | Wheat | nucleus, plastid | 11.22 | 12.92 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G334100.1 | EnsemblPlantsGene:TraesCS7D01G334100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | InterPro:SANT/Myb |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF42 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | MapMan:15.5.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:426152510..426154634
Molecular Weight (calculated)
55276.1 Da
IEP (calculated)
8.709
GRAVY (calculated)
-0.750
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVKEKEAL AAEILEDHRK GSSDDSLPPT GLDLNQGFSE GSDDGGDDDD GGSTSEVAGG GRSSSNNNSA NHESESSRGR HDKAEGSGER VPTVRQYNRS
101: KHPRLRWTPD LHMAFLHAVE RLGGQERATP KLVLQMMNVR GLSIAHVKSH LQMYRSKKIE HESSHERAAM SSVFSPMNFH MRRGDHPFHD MFFQRAAGST
201: LSSRFNDGGV FAPRNAGLPD ASRIYGLLQH RQHPLQTFDF KNSTSLRNQE WAFTQHAAAA RARAVNDNGP GKGLIHEMIF RKDGKPTSHL FDVRDAAASS
301: GTTSPSTTTT SQADRRPDGA KMGSMNWIGS SSRPVSKTMS ATGLEQGGHA QLPFRWRGAA GSNGCHPNGN TGRTTSSSDP VVTCEAGSPL LLPKQGVPRT
401: PAKATEETSI GAEARKTKTS AAAEENGWAP ELQLSLSPNA AADTVEKGKK RNSAGQEVSS DKVPLSLSLS LHGGVVDDDD GGGRDGRRLE VATGSSSKKA
501: ALGLSTLDLT MSIKALE
101: KHPRLRWTPD LHMAFLHAVE RLGGQERATP KLVLQMMNVR GLSIAHVKSH LQMYRSKKIE HESSHERAAM SSVFSPMNFH MRRGDHPFHD MFFQRAAGST
201: LSSRFNDGGV FAPRNAGLPD ASRIYGLLQH RQHPLQTFDF KNSTSLRNQE WAFTQHAAAA RARAVNDNGP GKGLIHEMIF RKDGKPTSHL FDVRDAAASS
301: GTTSPSTTTT SQADRRPDGA KMGSMNWIGS SSRPVSKTMS ATGLEQGGHA QLPFRWRGAA GSNGCHPNGN TGRTTSSSDP VVTCEAGSPL LLPKQGVPRT
401: PAKATEETSI GAEARKTKTS AAAEENGWAP ELQLSLSPNA AADTVEKGKK RNSAGQEVSS DKVPLSLSLS LHGGVVDDDD GGGRDGRRLE VATGSSSKKA
501: ALGLSTLDLT MSIKALE
001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
Arabidopsis Description
Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.