Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000270.1-P | Field mustard | nucleus | 81.35 | 92.36 |
| CDY42825 | Canola | nucleus | 91.13 | 91.13 |
| VIT_10s0003g01380.t01 | Wine grape | mitochondrion | 15.6 | 67.11 |
| CDY71094 | Canola | mitochondrion | 15.29 | 62.5 |
| AT2G42660.1 | Thale cress | nucleus | 47.71 | 61.18 |
| CDY00733 | Canola | mitochondrion, nucleus | 14.37 | 33.1 |
| CDY16660 | Canola | mitochondrion | 14.98 | 28.32 |
| PGSC0003DMT400011207 | Potato | nucleus | 20.49 | 28.27 |
| CDX97319 | Canola | mitochondrion | 17.74 | 28.02 |
| CDX94559 | Canola | mitochondrion | 14.07 | 26.59 |
| CDX74898 | Canola | nucleus | 27.52 | 26.32 |
| CDY69225 | Canola | mitochondrion | 13.15 | 26.06 |
| CDX91442 | Canola | nucleus | 27.83 | 26.0 |
| CDY45272 | Canola | nucleus | 19.27 | 25.51 |
| CDY70922 | Canola | nucleus | 20.18 | 25.48 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 23.85 | 25.41 |
| CDY09392 | Canola | nucleus | 20.18 | 25.19 |
| CDY41090 | Canola | nucleus | 18.96 | 25.1 |
| CDX82805 | Canola | nucleus | 18.35 | 24.79 |
| CDX81654 | Canola | nucleus | 18.35 | 24.79 |
| PGSC0003DMT400026419 | Potato | nucleus | 26.3 | 24.71 |
| CDY17617 | Canola | nucleus | 19.57 | 24.62 |
| CDY59419 | Canola | nucleus | 18.04 | 24.58 |
| Solyc02g076670.2.1 | Tomato | nucleus | 25.38 | 24.56 |
| CDY17443 | Canola | nucleus | 18.96 | 23.48 |
| KRH22274 | Soybean | nucleus | 26.3 | 23.31 |
| KRH27060 | Soybean | nucleus | 25.99 | 23.1 |
| CDY04115 | Canola | nucleus | 18.35 | 22.14 |
| CDY07612 | Canola | nucleus | 25.99 | 21.68 |
| CDY52431 | Canola | nucleus | 25.69 | 21.59 |
| KRH58975 | Soybean | nucleus | 26.3 | 21.45 |
| KRH42874 | Soybean | nucleus | 26.3 | 21.39 |
| KRH11029 | Soybean | nucleus | 23.85 | 21.37 |
| CDX74803 | Canola | nucleus | 24.46 | 20.83 |
| KRH21258 | Soybean | nucleus | 23.55 | 20.64 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 23.85 | 20.63 |
| CDY07070 | Canola | nucleus | 25.69 | 20.19 |
| CDY18860 | Canola | nucleus | 25.08 | 20.15 |
| CDX93206 | Canola | nucleus | 25.69 | 20.1 |
| CDY23916 | Canola | nucleus | 15.6 | 19.17 |
| CDY68011 | Canola | nucleus | 12.23 | 18.96 |
| TraesCS6A01G109700.1 | Wheat | nucleus | 27.52 | 18.87 |
| TraesCS6D01G098200.1 | Wheat | nucleus | 27.22 | 18.74 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 23.24 | 18.54 |
| OQU76531 | Sorghum | nucleus | 28.75 | 18.36 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 28.44 | 18.2 |
| HORVU6Hr1G019650.5 | Barley | nucleus | 26.61 | 18.12 |
| TraesCS7D01G334100.1 | Wheat | nucleus | 28.44 | 17.99 |
| CDY54255 | Canola | nucleus | 16.21 | 17.73 |
| CDX84102 | Canola | nucleus | 14.68 | 17.71 |
| EES04827 | Sorghum | nucleus | 28.75 | 17.7 |
| Zm00001d016175_P001 | Maize | nucleus | 29.05 | 17.59 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 27.83 | 17.37 |
| Os06t0543200-01 | Rice | nucleus | 28.75 | 17.31 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 26.91 | 17.02 |
| GSMUA_Achr10P... | Banana | nucleus | 26.61 | 16.8 |
| CDX78794 | Canola | nucleus | 15.9 | 16.67 |
| TraesCS6B01G138200.1 | Wheat | nucleus | 26.91 | 16.67 |
| Zm00001d037015_P001 | Maize | nucleus | 28.13 | 16.61 |
| Os02t0241200-00 | Rice | nucleus | 27.52 | 16.51 |
| Zm00001d046174_P001 | Maize | nucleus | 26.61 | 16.38 |
| CDY35557 | Canola | nucleus | 15.9 | 15.57 |
| CDY43006 | Canola | nucleus | 15.9 | 15.29 |
| CDX93847 | Canola | nucleus | 15.29 | 14.79 |
| CDY01293 | Canola | nucleus | 15.29 | 14.45 |
| CDY28659 | Canola | nucleus | 13.15 | 14.1 |
| CDY04116 | Canola | nucleus | 8.56 | 13.79 |
| CDX69443 | Canola | nucleus | 14.98 | 12.47 |
| CDX78699 | Canola | nucleus | 14.68 | 12.44 |
| CDX85500 | Canola | nucleus | 14.98 | 12.28 |
| CDX70701 | Canola | nucleus | 14.37 | 12.21 |
| CDY67252 | Canola | nucleus | 14.68 | 12.18 |
| CDY38105 | Canola | nucleus | 14.68 | 12.06 |
| CDY69675 | Canola | cytosol, nucleus | 3.36 | 9.48 |
| CDY02401 | Canola | nucleus | 17.13 | 8.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078JP45 | UniProt:A0A078JP45 | EnsemblPlants:CDY67147 | ProteinID:CDY67147 |
| ProteinID:CDY67147.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00059637001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EEF579 |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g56690DBnaA03g56690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JP45]
Coordinates
chrLK035806:+:6596..8682
Molecular Weight (calculated)
37390.9 Da
IEP (calculated)
9.436
GRAVY (calculated)
-0.590
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGTSSREKC AMWLDLNREE AVEKYNEEES SVEDEDQQVT SSNNVRQYVR SNMPRLRWTP DLHLSFVRAV QRLGGPHRAT PKMVLQMMNL KGLSIAHVKS
101: HLQMYRSKKL EATSLHEVGA MMGARRNYLL DMIDIPYGGL RHACYPKTVP SREHNQGTVF TNLGANFVMR PSSWCNRSSG HELNNVRGGL NRESMESKTL
201: PLLEEGDPRE KSPRRRGKRS TISQTIKTNE RRWDQHDALA VSVLNIIRRV TVVMASDIVE TIWVRLDSDP TELSVDKLMR ETDTIKFRAD RSSVESSLGL
301: RLRKRTCLAL EAASLIEKGF ECIFNCL
101: HLQMYRSKKL EATSLHEVGA MMGARRNYLL DMIDIPYGGL RHACYPKTVP SREHNQGTVF TNLGANFVMR PSSWCNRSSG HELNNVRGGL NRESMESKTL
201: PLLEEGDPRE KSPRRRGKRS TISQTIKTNE RRWDQHDALA VSVLNIIRRV TVVMASDIVE TIWVRLDSDP TELSVDKLMR ETDTIKFRAD RSSVESSLGL
301: RLRKRTCLAL EAASLIEKGF ECIFNCL
001: MAGRSSPGKC STWLDLNREE TVEKNNEEES SVEDEDQITN NVRQYIRSNM PRLRWTPDLH LSFVRAVQRL GGPDRATPKL VLEMMNLKGL SIAHVKSHLQ
101: MYRSKKLEPS SRPGFGAFMS GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR NDRDSTENKT LPLLEIRKKN
201: NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI NTMLSLSLLS TSSEP
101: MYRSKKLEPS SRPGFGAFMS GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR NDRDSTENKT LPLLEIRKKN
201: NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI NTMLSLSLLS TSSEP
Arabidopsis Description
At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.