Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78794 | Canola | nucleus | 96.68 | 65.38 |
| Bra040176.1-P | Field mustard | nucleus | 95.26 | 63.41 |
| CDY54255 | Canola | nucleus | 74.88 | 52.84 |
| AT4G17695.1 | Thale cress | nucleus | 80.09 | 52.48 |
| CDY71094 | Canola | mitochondrion | 16.59 | 43.75 |
| CDY69225 | Canola | mitochondrion | 25.59 | 32.73 |
| CDX84102 | Canola | nucleus | 39.34 | 30.63 |
| CDX93847 | Canola | nucleus | 43.6 | 27.22 |
| CDY01293 | Canola | nucleus | 43.6 | 26.59 |
| CDY43006 | Canola | nucleus | 42.65 | 26.47 |
| CDY35557 | Canola | nucleus | 41.71 | 26.35 |
| CDY23916 | Canola | nucleus | 33.18 | 26.32 |
| CDY28659 | Canola | nucleus | 37.91 | 26.23 |
| Solyc04g079600.2.1 | Tomato | nucleus | 32.23 | 22.08 |
| PGSC0003DMT400030518 | Potato | nucleus | 32.23 | 22.08 |
| VIT_18s0001g11390.t01 | Wine grape | nucleus | 33.65 | 21.58 |
| KRH05752 | Soybean | nucleus | 33.65 | 21.45 |
| CDY00733 | Canola | mitochondrion, nucleus | 14.22 | 21.13 |
| CDX70701 | Canola | nucleus | 37.91 | 20.78 |
| CDX78699 | Canola | nucleus | 37.91 | 20.73 |
| CDX69443 | Canola | nucleus | 37.91 | 20.36 |
| CDY38105 | Canola | nucleus | 38.39 | 20.35 |
| CDY67252 | Canola | nucleus | 37.91 | 20.3 |
| KRH51927 | Soybean | nucleus | 31.75 | 20.3 |
| CDX85500 | Canola | nucleus | 38.39 | 20.3 |
| KRH61226 | Soybean | nucleus | 31.75 | 20.24 |
| CDX97319 | Canola | mitochondrion | 16.59 | 16.91 |
| CDX94559 | Canola | mitochondrion | 13.74 | 16.76 |
| CDY16660 | Canola | mitochondrion | 13.74 | 16.76 |
| CDY41090 | Canola | nucleus | 18.48 | 15.79 |
| CDY45272 | Canola | nucleus | 18.01 | 15.38 |
| CDY59419 | Canola | nucleus | 17.06 | 15.0 |
| CDX82805 | Canola | nucleus | 17.06 | 14.88 |
| CDX81654 | Canola | nucleus | 17.06 | 14.88 |
| CDY70922 | Canola | nucleus | 17.54 | 14.29 |
| CDY09392 | Canola | nucleus | 17.54 | 14.12 |
| CDY04115 | Canola | nucleus | 17.54 | 13.65 |
| CDY17443 | Canola | nucleus | 17.06 | 13.64 |
| CDY17617 | Canola | nucleus | 16.11 | 13.08 |
| CDY67147 | Canola | nucleus | 18.96 | 12.23 |
| CDY42825 | Canola | nucleus | 18.96 | 12.23 |
| CDY02401 | Canola | nucleus | 33.18 | 11.22 |
| CDX74898 | Canola | nucleus | 17.54 | 10.82 |
| CDY52431 | Canola | nucleus | 19.91 | 10.8 |
| CDX91442 | Canola | nucleus | 17.54 | 10.57 |
| CDY07612 | Canola | nucleus | 19.43 | 10.46 |
| CDX74803 | Canola | nucleus | 18.01 | 9.9 |
| CDY07070 | Canola | nucleus | 19.43 | 9.86 |
| CDX93206 | Canola | nucleus | 18.96 | 9.57 |
| CDY18860 | Canola | nucleus | 18.01 | 9.34 |
| CDY04116 | Canola | nucleus | 6.16 | 6.4 |
| CDY69675 | Canola | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078JQR1 | UniProt:A0A078JQR1 | EnsemblPlants:CDY68011 | ProteinID:CDY68011 |
| ProteinID:CDY68011.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00068434001 |
| InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | PFAM:PF00249 | PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EDE8D1 | SEG:seg | : | : |
Description
BnaAnng25890DBnaAnng25890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQR1]
Coordinates
chrLK036763:+:6114..6893
Molecular Weight (calculated)
24787.2 Da
IEP (calculated)
8.146
GRAVY (calculated)
-0.873
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MELFPSQPDL YLKINRRREE QEEEDYKEQE EVQRRLLFGS KASDSDRKAS DHLIHTLQFT SNNEPTKIDH NQERMESLDQ DLRSNFMVRP IRGIPLHQNQ
101: ILDHYYYSPT PPFFFSEVNG QHANPSYSYN LHHRHHRQAQ PQAQRLTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD VQDLTLAHVK
201: SHLQVILSIS S
101: ILDHYYYSPT PPFFFSEVNG QHANPSYSYN LHHRHHRQAQ PQAQRLTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD VQDLTLAHVK
201: SHLQVILSIS S
001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP
Arabidopsis Description
KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.