Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017021.1-P | Field mustard | nucleus | 85.82 | 98.08 |
| CDX93206 | Canola | nucleus | 96.63 | 96.17 |
| CDX74803 | Canola | nucleus | 75.48 | 81.77 |
| CDY07612 | Canola | nucleus | 76.92 | 81.63 |
| CDY52431 | Canola | nucleus | 75.96 | 81.23 |
| CDY18860 | Canola | nucleus | 79.09 | 80.84 |
| CDY71094 | Canola | mitochondrion | 11.78 | 61.25 |
| Os11t0106100-00 | Rice | nucleus | 19.23 | 37.56 |
| CDX74898 | Canola | nucleus | 28.37 | 34.5 |
| TraesCS5A01G153000.1 | Wheat | nucleus | 26.44 | 33.74 |
| CDX91442 | Canola | nucleus | 28.37 | 33.71 |
| TraesCS5D01G158300.1 | Wheat | nucleus | 26.2 | 33.64 |
| CDY00733 | Canola | mitochondrion, nucleus | 11.3 | 33.1 |
| TraesCS5B01G151800.1 | Wheat | nucleus | 26.68 | 32.94 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 25.72 | 32.23 |
| TraesCS4A01G180900.1 | Wheat | nucleus | 25.72 | 31.38 |
| TraesCS4D01G131500.1 | Wheat | nucleus | 25.48 | 31.09 |
| TraesCS4B01G136900.1 | Wheat | nucleus | 24.76 | 30.38 |
| CDX81654 | Canola | nucleus | 17.31 | 29.75 |
| CDX82805 | Canola | nucleus | 17.31 | 29.75 |
| CDY69225 | Canola | mitochondrion | 11.78 | 29.7 |
| CDY59419 | Canola | nucleus | 17.07 | 29.58 |
| CDX94559 | Canola | mitochondrion | 12.26 | 29.48 |
| CDY16660 | Canola | mitochondrion | 12.02 | 28.9 |
| CDY45272 | Canola | nucleus | 17.07 | 28.74 |
| Zm00001d005087_P001 | Maize | nucleus | 23.8 | 28.45 |
| EES09087 | Sorghum | nucleus | 24.76 | 28.37 |
| CDY41090 | Canola | nucleus | 16.83 | 28.34 |
| Os12t0105600-01 | Rice | nucleus | 21.15 | 28.03 |
| CDY17617 | Canola | nucleus | 17.31 | 27.69 |
| EES15503 | Sorghum | nucleus | 24.28 | 27.6 |
| CDY09392 | Canola | nucleus | 17.31 | 27.48 |
| CDY70922 | Canola | nucleus | 17.07 | 27.41 |
| CDY42825 | Canola | nucleus | 21.15 | 26.91 |
| CDY17443 | Canola | nucleus | 16.35 | 25.76 |
| CDY67147 | Canola | nucleus | 20.19 | 25.69 |
| CDX97319 | Canola | mitochondrion | 12.5 | 25.12 |
| CDY04115 | Canola | nucleus | 15.62 | 23.99 |
| CDY23916 | Canola | nucleus | 12.74 | 19.92 |
| CDY68011 | Canola | nucleus | 9.86 | 19.43 |
| CDX84102 | Canola | nucleus | 12.02 | 18.45 |
| CDY69675 | Canola | cytosol, nucleus | 4.81 | 17.24 |
| CDY54255 | Canola | nucleus | 12.26 | 17.06 |
| CDX78794 | Canola | nucleus | 12.5 | 16.67 |
| CDY35557 | Canola | nucleus | 12.98 | 16.17 |
| CDY43006 | Canola | nucleus | 12.98 | 15.88 |
| CDX93847 | Canola | nucleus | 12.74 | 15.68 |
| CDY01293 | Canola | nucleus | 12.98 | 15.61 |
| CDY28659 | Canola | nucleus | 11.3 | 15.41 |
| CDY04116 | Canola | nucleus | 7.45 | 15.27 |
| CDX70701 | Canola | nucleus | 13.46 | 14.55 |
| CDX78699 | Canola | nucleus | 13.46 | 14.51 |
| CDX69443 | Canola | nucleus | 13.22 | 13.99 |
| CDY67252 | Canola | nucleus | 13.22 | 13.96 |
| CDY38105 | Canola | nucleus | 12.98 | 13.57 |
| CDX85500 | Canola | nucleus | 12.98 | 13.53 |
| CDY02401 | Canola | nucleus | 13.46 | 8.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078EYA6 | EnsemblPlants:CDY07070 | ProteinID:CDY07070 | ProteinID:CDY07070.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00123390001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EEDF52 |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g22450D
Coordinates
chrLK031974:-:920766..922798
Molecular Weight (calculated)
46884.8 Da
IEP (calculated)
6.565
GRAVY (calculated)
-1.127
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPSSQSSEN SKTCPSNNFK ATTTKEDNDK DEEEEEEEEE EEEEDEEERS ADQSPSSNSY VEESGSQHHH NNNDQIKKNG GSVRPYNRSK TPRLRWTPEL
101: HLCFLQAVER LGGPDRATPK LVLQLMNVKG LSIAHVKSHL QMYRSKKIDD LNQGDQGFSF EHGAGYTYNL SQPPMLQSFD QGPSTSLGYG GGSWIDHRRQ
201: VYRSPWRGLT ARDNTRTRQT LFSSQLGERF HGVSNSILDD KNKTISFRTN SREAAHASNG IGEAVPRSHR SFLEGMKTFN KSWGQSFPSN PNPSMPSKPQ
301: DHTAVTLNFH QSDNPRVGEE TENDLKRKRL LLSGDYNKSN PDLDLSLSLK VPPTHNNLGE CLLEEGEKEH EDSKRLSLSL SSSSLSQHGR AIRKEDQNDH
401: KKRKISVLAS PLDLTL
101: HLCFLQAVER LGGPDRATPK LVLQLMNVKG LSIAHVKSHL QMYRSKKIDD LNQGDQGFSF EHGAGYTYNL SQPPMLQSFD QGPSTSLGYG GGSWIDHRRQ
201: VYRSPWRGLT ARDNTRTRQT LFSSQLGERF HGVSNSILDD KNKTISFRTN SREAAHASNG IGEAVPRSHR SFLEGMKTFN KSWGQSFPSN PNPSMPSKPQ
301: DHTAVTLNFH QSDNPRVGEE TENDLKRKRL LLSGDYNKSN PDLDLSLSLK VPPTHNNLGE CLLEEGEKEH EDSKRLSLSL SSSSLSQHGR AIRKEDQNDH
401: KKRKISVLAS PLDLTL
001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.