Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017425.1-P | Field mustard | nucleus | 92.61 | 94.95 |
| CDY04115 | Canola | nucleus | 100.0 | 74.91 |
| CDY69675 | Canola | cytosol, nucleus | 40.39 | 70.69 |
| CDY17443 | Canola | nucleus | 89.16 | 68.56 |
| CDY70922 | Canola | nucleus | 70.44 | 55.21 |
| CDY09392 | Canola | nucleus | 69.95 | 54.2 |
| CDY17617 | Canola | nucleus | 68.97 | 53.85 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 67.49 | 53.52 |
| CDY45272 | Canola | nucleus | 48.28 | 39.68 |
| CDY41090 | Canola | nucleus | 48.28 | 39.68 |
| CDX81654 | Canola | nucleus | 46.8 | 39.26 |
| CDX82805 | Canola | nucleus | 46.31 | 38.84 |
| CDY59419 | Canola | nucleus | 45.81 | 38.75 |
| KRH36060 | Soybean | nucleus | 30.05 | 25.0 |
| CDY71094 | Canola | mitochondrion | 8.87 | 22.5 |
| KRH49492 | Soybean | nucleus | 29.56 | 20.0 |
| KRG89170 | Soybean | nucleus | 28.57 | 19.73 |
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 21.18 | 14.19 |
| KRG90693 | Soybean | nucleus | 20.69 | 13.86 |
| CDX94559 | Canola | mitochondrion | 10.84 | 12.72 |
| CDY00733 | Canola | mitochondrion, nucleus | 8.87 | 12.68 |
| PGSC0003DMT400075668 | Potato | nucleus | 19.21 | 12.66 |
| CDY16660 | Canola | mitochondrion | 10.34 | 12.14 |
| Solyc04g008480.1.1 | Tomato | nucleus | 17.73 | 12.12 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 16.26 | 11.3 |
| CDX97319 | Canola | mitochondrion | 11.33 | 11.11 |
| CDX74898 | Canola | nucleus | 17.24 | 10.23 |
| CDX91442 | Canola | nucleus | 16.75 | 9.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.79 | 9.49 |
| CDY69225 | Canola | mitochondrion | 7.39 | 9.09 |
| CDY52431 | Canola | nucleus | 17.24 | 9.0 |
| GSMUA_Achr11P... | Banana | nucleus | 10.34 | 8.97 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 10.84 | 8.87 |
| CDY42825 | Canola | nucleus | 14.29 | 8.87 |
| CDX74803 | Canola | nucleus | 16.26 | 8.59 |
| CDY67147 | Canola | nucleus | 13.79 | 8.56 |
| CDY07612 | Canola | nucleus | 15.76 | 8.16 |
| CDY18860 | Canola | nucleus | 15.76 | 7.86 |
| CDX93206 | Canola | nucleus | 15.76 | 7.66 |
| CDY07070 | Canola | nucleus | 15.27 | 7.45 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 10.34 | 7.34 |
| CDX78794 | Canola | nucleus | 10.84 | 7.05 |
| CDY54255 | Canola | nucleus | 9.85 | 6.69 |
| CDX84102 | Canola | nucleus | 8.87 | 6.64 |
| CDY35557 | Canola | nucleus | 10.84 | 6.59 |
| CDX93847 | Canola | nucleus | 10.84 | 6.51 |
| CDY01293 | Canola | nucleus | 10.84 | 6.36 |
| CDY43006 | Canola | nucleus | 10.34 | 6.18 |
| CDY68011 | Canola | nucleus | 6.4 | 6.16 |
| CDY23916 | Canola | nucleus | 7.88 | 6.02 |
| CDY28659 | Canola | nucleus | 6.9 | 4.59 |
| CDX69443 | Canola | nucleus | 8.87 | 4.58 |
| CDY67252 | Canola | nucleus | 8.87 | 4.57 |
| CDX70701 | Canola | nucleus | 8.37 | 4.42 |
| CDX78699 | Canola | nucleus | 8.37 | 4.4 |
| CDY38105 | Canola | nucleus | 8.37 | 4.27 |
| CDX85500 | Canola | nucleus | 8.37 | 4.26 |
| CDY02401 | Canola | nucleus | 7.88 | 2.56 |
Protein Annotations
| EnsemblPlants:CDY04116 | EnsemblPlantsGene:GSBRNA2T00117770001 | GO:A0A078ESA6 | ProteinID:CDY04116 | ProteinID:CDY04116.1 | SEG:seg |
| UniParc:UPI0004EDD438 | MapMan:35.2 | : | : | : | : |
Description
BnaA09g18940D
Coordinates
chrLK031949:+:246284..248380
Molecular Weight (calculated)
23218.5 Da
IEP (calculated)
6.215
GRAVY (calculated)
-0.840
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDVKGLTIS HVKSHLQNIH FGHSLILYYY YYFETEENSL FSIRRQDTEE DYLQDNLSLH TRNDCPTGFH TFSLSSHSSL RGRRKGHTSE SRGGDDVDDS
101: LHIMNMKTNG TTTFPSHHFH QNTEKETNPW HEHEHEHKHE HEEEELSLSL SLNHHHLRSN GSSVSETSDA VSTCSAPFVN KDCFGSSPKI DLDLNLSISL
201: LGS
101: LHIMNMKTNG TTTFPSHHFH QNTEKETNPW HEHEHEHKHE HEEEELSLSL SLNHHHLRSN GSSVSETSDA VSTCSAPFVN KDCFGSSPKI DLDLNLSISL
201: LGS
001: MMDVKGLTIS HVKSHLQMYR GGSKLTLEKP EESSSSSIRR RQDSEEDYYL HDNLSLHTRN DCLLGFHSFP LSSHSSFRGG GGGRTKEQQT SESGGYDDDA
101: DFLHIKKMND TTTFLSHHFP KGTEEWREQE HEEEEEDLSL SLSLNHHHWR SNGSSVVSET SEAAVSTCSA PFVSKDCFGS SKIDLNLSIS LLGS
101: DFLHIKKMND TTTFLSHHFP KGTEEWREQE HEEEEEDLSL SLSLNHHHWR SNGSSVVSET SEAAVSTCSA PFVSKDCFGS SKIDLNLSIS LLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.