Factsheet for Bra017425.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04116	Canola	nucleus	94.95	92.61
CDY17443	Canola	nucleus	95.96	71.97
CDY04115	Canola	nucleus	95.45	69.74
CDY70922	Canola	nucleus	76.26	58.3
Bra026618.1-P	Field mustard	nucleus	75.76	57.25
Bra024836.1-P	Field mustard	nucleus	74.24	56.76
AT2G02060.1	Thale cress	nucleus, plastid	72.73	56.25
Bra026818.1-P	Field mustard	nucleus	48.99	40.42
Bra026202.1-P	Field mustard	nucleus	39.39	39.0
KRH36060	Soybean	nucleus	32.32	26.23
Bra018498.1-P	Field mustard	mitochondrion	7.58	21.13
KRH49492	Soybean	nucleus	31.82	21.0
KRG89170	Soybean	nucleus	30.81	20.75
VIT_01s0137g00050.t01	Wine grape	nucleus	23.23	15.18
KRG90693	Soybean	nucleus	22.22	14.52
Bra029503.1-P	Field mustard	mitochondrion	12.12	13.95
PGSC0003DMT400075668	Potato	nucleus	21.21	13.64
Solyc04g008480.1.1	Tomato	nucleus	19.7	13.13
GSMUA_Achr2P11010_001	Banana	nucleus	18.69	12.67
Bra005124.1-P	Field mustard	nucleus	19.7	11.57
Bra021038.1-P	Field mustard	plastid	9.6	10.61
GSMUA_AchrUn_...	Banana	nucleus	15.15	10.17
GSMUA_Achr11P...	Banana	nucleus	11.62	9.83
GSMUA_Achr4P25920_001	Banana	nucleus	12.12	9.68
Bra000180.1-P	Field mustard	nucleus	17.68	9.0
Bra004973.1-P	Field mustard	nucleus	18.18	8.85
Bra040176.1-P	Field mustard	nucleus	13.13	8.2
GSMUA_Achr5P19200_001	Banana	nucleus	11.62	8.04
Bra023254.1-P	Field mustard	nucleus	13.13	7.1
Bra033844.1-P	Field mustard	nucleus	13.13	6.63
Bra017021.1-P	Field mustard	nucleus	11.62	6.32
Bra008613.1-P	Field mustard	nucleus	8.59	5.84
Bra000270.1-P	Field mustard	nucleus	8.08	5.56
Bra023570.1-P	Field mustard	cytosol	10.1	5.03
Bra035311.1-P	Field mustard	nucleus	9.6	3.04
Bra006360.1-P	Field mustard	nucleus	4.55	1.23

Protein Annotations

EnsemblPlants:Bra017425.1	EnsemblPlants:Bra017425.1-P	EnsemblPlantsGene:Bra017425	Gene3D:1.10.10.60	PANTHER:PTHR31314	PANTHER:PTHR31314:SF41
SEG:seg	UniParc:UPI00025422CC	UniProt:M4DLP4	MapMan:35.1	:	:

Description

AT2G02060 (E=9e-036) | transcription factor

Coordinates

chrA09:-:15211246..15212550

Molecular Weight (calculated)

22404.8 Da

IEP (calculated)

6.590

GRAVY (calculated)

-0.925

Length

198 amino acids

Sequence
(BLAST)

001: MMDVKGLTIS HVKSHLQMHR GSKLTLGKPE ENSLFSIRRQ DTEEDYLQDY LSLHTRNDCP TGFHTFSLSS HSSLRRGRRK GHTSESRGGD DVDDSLHIMN
101: MKTNGTTTFP SHHFHQNTEK ETNPWHEHEH EHKHEHEEEE LSLSLSLNHH HLRSNGSSVS ETSDAVSTCS APFVNKDCFG SSPKIDLDLN LSISLLGS

Best Arabidopsis Sequence Match ( AT2G02060.3 )
(BLAST)

001: MMDVKGLTIS HVKSHLQMYR GGSKLTLEKP EESSSSSIRR RQDSEEDYYL HDNLSLHTRN DCLLGFHSFP LSSHSSFRGG GGGRTKEQQT SESGGYDDDA
101: DFLHIKKMND TTTFLSHHFP KGTEEWREQE HEEEEEDLSL SLSLNHHHWR SNGSSVVSET SEAAVSTCSA PFVSKDCFGS SKIDLNLSIS LLGS

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.