Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04116 | Canola | nucleus | 74.91 | 100.0 |
| Bra017425.1-P | Field mustard | nucleus | 69.74 | 95.45 |
| CDY17443 | Canola | nucleus | 90.77 | 93.18 |
| CDY70922 | Canola | nucleus | 74.91 | 78.38 |
| CDY09392 | Canola | nucleus | 74.54 | 77.1 |
| CDY17617 | Canola | nucleus | 70.85 | 73.85 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 68.27 | 72.27 |
| CDY69675 | Canola | cytosol, nucleus | 30.26 | 70.69 |
| CDY71094 | Canola | mitochondrion | 18.08 | 61.25 |
| CDY45272 | Canola | nucleus | 50.55 | 55.47 |
| CDY41090 | Canola | nucleus | 50.55 | 55.47 |
| CDX81654 | Canola | nucleus | 49.45 | 55.37 |
| CDX82805 | Canola | nucleus | 49.08 | 54.96 |
| CDY59419 | Canola | nucleus | 47.97 | 54.17 |
| KRG89170 | Soybean | nucleus | 34.32 | 31.63 |
| KRH49492 | Soybean | nucleus | 34.69 | 31.33 |
| CDY00733 | Canola | mitochondrion, nucleus | 14.76 | 28.17 |
| CDX97319 | Canola | mitochondrion | 19.93 | 26.09 |
| CDX94559 | Canola | mitochondrion | 16.24 | 25.43 |
| KRG90693 | Soybean | nucleus | 28.41 | 25.41 |
| KRH36060 | Soybean | nucleus | 22.51 | 25.0 |
| CDY16660 | Canola | mitochondrion | 15.87 | 24.86 |
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 27.68 | 24.75 |
| GSMUA_Achr11P... | Banana | nucleus | 21.03 | 24.36 |
| PGSC0003DMT400075668 | Potato | nucleus | 26.57 | 23.38 |
| Solyc04g008480.1.1 | Tomato | nucleus | 25.46 | 23.23 |
| CDY69225 | Canola | mitochondrion | 13.65 | 22.42 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 19.93 | 21.77 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 23.25 | 21.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.14 | 20.34 |
| CDX74898 | Canola | nucleus | 25.46 | 20.18 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 21.03 | 19.93 |
| CDX91442 | Canola | nucleus | 25.09 | 19.43 |
| CDY42825 | Canola | nucleus | 22.51 | 18.65 |
| CDY67147 | Canola | nucleus | 22.14 | 18.35 |
| CDY68011 | Canola | nucleus | 13.65 | 17.54 |
| CDY52431 | Canola | nucleus | 25.09 | 17.48 |
| CDX74803 | Canola | nucleus | 23.99 | 16.93 |
| CDY07612 | Canola | nucleus | 23.99 | 16.58 |
| CDY18860 | Canola | nucleus | 23.62 | 15.72 |
| CDY07070 | Canola | nucleus | 23.99 | 15.62 |
| CDX84102 | Canola | nucleus | 15.5 | 15.5 |
| CDX93206 | Canola | nucleus | 23.62 | 15.31 |
| CDX78794 | Canola | nucleus | 16.97 | 14.74 |
| CDY54255 | Canola | nucleus | 16.24 | 14.72 |
| CDY23916 | Canola | nucleus | 14.39 | 14.66 |
| CDY35557 | Canola | nucleus | 17.34 | 14.07 |
| CDX93847 | Canola | nucleus | 17.34 | 13.91 |
| CDY01293 | Canola | nucleus | 17.34 | 13.58 |
| CDY43006 | Canola | nucleus | 16.97 | 13.53 |
| CDY28659 | Canola | nucleus | 14.76 | 13.11 |
| CDX69443 | Canola | nucleus | 16.24 | 11.2 |
| CDX70701 | Canola | nucleus | 15.87 | 11.17 |
| CDY67252 | Canola | nucleus | 16.24 | 11.17 |
| CDX78699 | Canola | nucleus | 15.87 | 11.14 |
| CDY38105 | Canola | nucleus | 15.87 | 10.8 |
| CDX85500 | Canola | nucleus | 15.87 | 10.78 |
| CDY02401 | Canola | nucleus | 14.39 | 6.25 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078EQ82 | EnsemblPlants:CDY04115 | ProteinID:CDY04115 | ProteinID:CDY04115.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00117769001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 |
| PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EEEAA0 | SEG:seg |
Description
BnaA09g18930D
Coordinates
chrLK031949:+:242686..245681
Molecular Weight (calculated)
30639.5 Da
IEP (calculated)
6.943
GRAVY (calculated)
-0.816
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRGGKNGN ENYDGVGFNG QGGSGVRSYV RSPVPRLKWT PDLHRCFVNA VDMLGGQHRA TPKLVLKMMD VKGLTISHVK SHLQNIHFGH SLILYYYYYF
101: ETEENSLFSI RRQDTEEDYL QDNLSLHTRN DCPTGFHTFS LSSHSSLRRG RRKGHTSESR GGDDVDDSLH IMNMKTNGTT TFPSHHFHQN TEKETNPWHE
201: HEHEHKHEHE EEELSLSLSL NHHHLRSNGS SVSETSDAVS TCSAPFVNKD CFGSSPKIDL DLNLSISLLG S
101: ETEENSLFSI RRQDTEEDYL QDNLSLHTRN DCPTGFHTFS LSSHSSLRRG RRKGHTSESR GGDDVDDSLH IMNMKTNGTT TFPSHHFHQN TEKETNPWHE
201: HEHEHKHEHE EEELSLSLSL NHHHLRSNGS SVSETSDAVS TCSAPFVNKD CFGSSPKIDL DLNLSISLLG S
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.