Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 52.45 | 64.1 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 13.99 | 44.44 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 15.73 | 41.28 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 30.77 | 35.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.31 | 34.24 |
| Bra026202.1-P | Field mustard | nucleus | 20.63 | 29.5 |
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 28.67 | 27.06 |
| KRG90693 | Soybean | nucleus | 27.27 | 25.74 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 15.04 | 25.44 |
| PGSC0003DMT400075668 | Potato | nucleus | 27.27 | 25.32 |
| CDX81654 | Canola | nucleus | 21.33 | 25.21 |
| CDX82805 | Canola | nucleus | 21.33 | 25.21 |
| CDY41090 | Canola | nucleus | 21.68 | 25.1 |
| CDY45272 | Canola | nucleus | 21.68 | 25.1 |
| Bra026818.1-P | Field mustard | nucleus | 20.98 | 25.0 |
| CDY59419 | Canola | nucleus | 20.98 | 25.0 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 24.83 | 24.32 |
| Solyc04g008480.1.1 | Tomato | nucleus | 25.17 | 24.24 |
| KRG89170 | Soybean | nucleus | 24.83 | 24.15 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 20.98 | 23.44 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 16.78 | 23.41 |
| Bra024836.1-P | Field mustard | nucleus | 20.98 | 23.17 |
| CDY70922 | Canola | nucleus | 20.98 | 23.17 |
| AT1G14600.1 | Thale cress | nucleus | 20.63 | 23.14 |
| CDY17617 | Canola | nucleus | 20.98 | 23.08 |
| KRH49492 | Soybean | nucleus | 24.13 | 23.0 |
| CDY09392 | Canola | nucleus | 20.98 | 22.9 |
| Bra026618.1-P | Field mustard | nucleus | 20.98 | 22.9 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 16.08 | 22.33 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 25.52 | 21.99 |
| CDY17443 | Canola | nucleus | 20.28 | 21.97 |
| CDY04115 | Canola | nucleus | 19.93 | 21.03 |
| GSMUA_Achr11P... | Banana | nucleus | 17.13 | 20.68 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 15.73 | 19.91 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 15.04 | 19.63 |
| GSMUA_Achr10P... | Banana | nucleus | 14.34 | 19.62 |
| GSMUA_Achr10P... | Banana | nucleus | 18.88 | 19.42 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 15.04 | 19.2 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 17.83 | 18.96 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 26.92 | 18.78 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 16.43 | 18.73 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 16.78 | 17.65 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 16.43 | 17.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.53 | 16.93 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 22.38 | 16.93 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 15.04 | 16.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.18 | 16.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.53 | 15.5 |
| KRH36060 | Soybean | nucleus | 12.59 | 14.75 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 17.83 | 14.41 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 17.83 | 14.37 |
| GSMUA_Achr10P... | Banana | nucleus | 25.52 | 14.09 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 18.18 | 13.79 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 17.83 | 13.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.48 | 12.63 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 17.83 | 12.35 |
| Bra017425.1-P | Field mustard | nucleus | 8.04 | 11.62 |
| CDY04116 | Canola | nucleus | 7.34 | 10.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G19200_001 |
| EnsemblPlants:GSMUA_Achr5P19200_001 | EnsemblPlants:GSMUA_Achr5T19200_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0SZU9 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00029484CE | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G19200_001]
Coordinates
chr5:-:20715209..20716447
Molecular Weight (calculated)
32014.0 Da
IEP (calculated)
8.626
GRAVY (calculated)
-0.603
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDFGRNSGA VRQYTRSKVP RLRWTPDLHH CFVNAIERLG GQEKATPKLV LQMMDVRGLT ISHVKSHLQM YRSLRNDMGR QELQARKHLC FDNDGNGDER
101: SDDASCTDSK PTTEFQSRFL YATLPPVKSS LCPNLCSSLT NRQCSQGVVE RVTSWSCYDT CMQALGVEGG AQEQGLWWQK DAAPTKAFHH PAPKLKVPGS
201: NRQCNQGVVE RVTSWSCYDT CMRALGSEGG AQEEGLWWHK DAVPAMAFHH PAPKLKVPGS RAEEPIPFQV NQKARNNPAI PVFFTL
101: SDDASCTDSK PTTEFQSRFL YATLPPVKSS LCPNLCSSLT NRQCSQGVVE RVTSWSCYDT CMQALGVEGG AQEQGLWWQK DAAPTKAFHH PAPKLKVPGS
201: NRQCNQGVVE RVTSWSCYDT CMRALGSEGG AQEEGLWWHK DAVPAMAFHH PAPKLKVPGS RAEEPIPFQV NQKARNNPAI PVFFTL
001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.