Factsheet for Bra026618.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09392	Canola	nucleus	100.0	100.0
Bra024836.1-P	Field mustard	nucleus	80.92	81.85
AT2G02060.1	Thale cress	nucleus, plastid	78.63	80.47
Bra017425.1-P	Field mustard	nucleus	57.25	75.76
Bra018498.1-P	Field mustard	mitochondrion	17.18	63.38
Bra026202.1-P	Field mustard	nucleus	47.71	62.5
Bra026818.1-P	Field mustard	nucleus	56.87	62.08
KRG89170	Soybean	nucleus	38.17	34.01
KRH49492	Soybean	nucleus	38.93	34.0
Bra029503.1-P	Field mustard	mitochondrion	19.47	29.65
KRH36060	Soybean	nucleus	26.72	28.69
KRG90693	Soybean	nucleus	32.06	27.72
VIT_01s0137g00050.t01	Wine grape	nucleus	31.68	27.39
GSMUA_Achr11P...	Banana	nucleus	23.28	26.07
Bra021038.1-P	Field mustard	plastid	17.56	25.7
GSMUA_Achr2P11010_001	Banana	nucleus	28.24	25.34
PGSC0003DMT400075668	Potato	nucleus	29.39	25.0
Solyc04g008480.1.1	Tomato	nucleus	28.24	24.92
GSMUA_Achr4P25920_001	Banana	nucleus	22.14	23.39
GSMUA_AchrUn_...	Banana	nucleus	25.57	22.71
Bra005124.1-P	Field mustard	nucleus	28.63	22.26
GSMUA_Achr5P19200_001	Banana	nucleus	22.9	20.98
Bra000180.1-P	Field mustard	nucleus	27.1	18.25
Bra004973.1-P	Field mustard	nucleus	27.1	17.44
Bra040176.1-P	Field mustard	nucleus	20.61	17.03
Bra008613.1-P	Field mustard	nucleus	17.18	15.46
Bra023254.1-P	Field mustard	nucleus	21.37	15.3
Bra033844.1-P	Field mustard	nucleus	21.76	14.54
Bra000270.1-P	Field mustard	nucleus	15.65	14.24
Bra023570.1-P	Field mustard	cytosol	19.08	12.56
Bra017021.1-P	Field mustard	nucleus	11.07	7.97
Bra035311.1-P	Field mustard	nucleus	16.79	7.05
Bra006360.1-P	Field mustard	nucleus	12.6	4.5

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra026618	EnsemblPlants:Bra026618.1	EnsemblPlants:Bra026618.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4ECV8	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF41	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002546A89	SEG:seg	:	:

Description

AT2G02060 (E=8e-058) | transcription factor

Coordinates

chrA02:-:20748336..20750366

Molecular Weight (calculated)

29348.4 Da

IEP (calculated)

8.085

GRAVY (calculated)

-0.804

Length

262 amino acids

Sequence
(BLAST)

001: MGKAAGRNGN ENYNGVGFNG QRGGGVRPYV RSPVPRLRWT PDLHRCFVNA VDMLGGQHRA TPKLVLKMMD VKGLTISHVK SHLQMYRGSK LTLGKPEESS
101: SSSIRRQDTE EDNFHDNLSL HTRNDCLLGF HSFPLSSHSS LRGGRKKEQT SESSGDDDAD ADFLHTMNMK KTKETTMFRS HHFHKKTEKE KNTWQEHEEE
201: EDLSLSLSLN HHHWRSNGSS VSETSEAVST CSAPFIFKDC LGSSPKIDLN LDLNLSISLL GS

Best Arabidopsis Sequence Match ( AT2G02060.1 )
(BLAST)

001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.