Factsheet for Bra021038.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54255	Canola	nucleus	93.85	56.19
Bra018498.1-P	Field mustard	mitochondrion	18.99	47.89
Bra040176.1-P	Field mustard	nucleus	83.24	47.0
AT4G17695.1	Thale cress	nucleus	79.89	44.41
Bra023254.1-P	Field mustard	nucleus	48.04	23.5
Bra008613.1-P	Field mustard	nucleus	37.43	23.02
Bra033844.1-P	Field mustard	nucleus	49.16	22.45
Solyc04g079600.2.1	Tomato	nucleus	37.99	22.08
PGSC0003DMT400030518	Potato	nucleus	37.99	22.08
KRH05752	Soybean	nucleus	40.78	22.05
VIT_18s0001g11390.t01	Wine grape	nucleus	40.22	21.88
Bra026202.1-P	Field mustard	nucleus	22.91	20.5
KRH51927	Soybean	nucleus	36.87	20.0
KRH61226	Soybean	nucleus	36.87	19.94
Bra029503.1-P	Field mustard	mitochondrion	18.99	19.77
Bra023570.1-P	Field mustard	cytosol	40.78	18.34
Bra026618.1-P	Field mustard	nucleus	25.7	17.56
Bra026818.1-P	Field mustard	nucleus	22.35	16.67
Bra024836.1-P	Field mustard	nucleus	23.46	16.22
Bra005124.1-P	Field mustard	nucleus	25.7	13.65
Bra004973.1-P	Field mustard	nucleus	24.58	10.81
Bra000180.1-P	Field mustard	nucleus	23.46	10.8
Bra035311.1-P	Field mustard	nucleus	35.75	10.26
Bra017425.1-P	Field mustard	nucleus	10.61	9.6
Bra000270.1-P	Field mustard	nucleus	11.73	7.29
Bra006360.1-P	Field mustard	nucleus	21.79	5.32
Bra017021.1-P	Field mustard	nucleus	6.15	3.02

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra021038	EnsemblPlants:Bra021038.1	EnsemblPlants:Bra021038.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:M4DWZ2	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00025470A5	SEG:seg

Description

AT4G17695 (E=3e-056) KAN3 | KAN3 (KANADI 3); DNA binding / transcription factor

Coordinates

chrA08:-:10286432..10288742

Molecular Weight (calculated)

20269.0 Da

IEP (calculated)

10.717

GRAVY (calculated)

-0.836

Length

179 amino acids

Sequence
(BLAST)

001: MVSQNQTLGH YYYSPSPPFF FSEVNGQHAN PNYSYKLHHR QAQPQPQRCT AKRGVRAPRM RWTTTLHAHF VRAVQLLGGH ERATPKSVLE LMDVQDLTLA
101: HVKSHLQMYR TIKSTKKPTT SPGQSDTCEN GSQVKSERQA RDLQGLWNSS SREARLHLKA NASGLDVSSN KVSTFQKLN

Best Arabidopsis Sequence Match ( AT4G17695.1 )
(BLAST)

001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP

Arabidopsis Description

KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.