Factsheet for Bra023254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033844.1-P	Field mustard	nucleus	90.71	84.69
CDY43006	Canola	nucleus	77.32	83.24
KRH74367	Soybean	nucleus	45.08	59.78
GSMUA_Achr1P23970_001	Banana	nucleus	30.33	54.15
Bra018498.1-P	Field mustard	mitochondrion	10.38	53.52
KRH39575	Soybean	nucleus	56.83	53.33
GSMUA_Achr2P18070_001	Banana	nucleus	38.52	52.42
VIT_02s0012g01940.t01	Wine grape	nucleus	52.19	51.9
GSMUA_Achr11P...	Banana	nucleus	32.51	50.21
GSMUA_Achr3P00380_001	Banana	nucleus	34.7	48.47
Bra021038.1-P	Field mustard	plastid	23.5	48.04
GSMUA_Achr9P23320_001	Banana	nucleus	28.42	46.02
Bra040176.1-P	Field mustard	nucleus	36.34	41.96
GSMUA_AchrUn_...	Banana	nucleus	37.7	40.35
HORVU6Hr1G000410.1	Barley	nucleus	35.52	39.51
TraesCS6A01G007300.1	Wheat	nucleus	35.52	39.16
TraesCS6B01G012800.1	Wheat	nucleus	35.52	39.04
TraesCS6D01G011600.1	Wheat	nucleus	35.25	38.86
GSMUA_AchrUn_...	Banana	nucleus	32.79	38.34
Bra008613.1-P	Field mustard	nucleus	30.05	37.8
GSMUA_AchrUn_...	Banana	nucleus	33.33	37.54
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	41.53	36.8
GSMUA_AchrUn_...	Banana	nucleus	39.62	36.62
GSMUA_Achr8P30770_001	Banana	nucleus	31.15	32.11
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	30.87	31.65
PGSC0003DMT400034663	Potato	nucleus	38.8	31.56
TraesCS6B01G293700.1	Wheat	nucleus	30.6	31.55
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	30.33	31.27
Solyc11g011770.1.1	Tomato	nucleus	39.07	30.95
Os09t0395300-01	Rice	nucleus	31.42	30.5
Bra023570.1-P	Field mustard	cytosol	32.79	30.15
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	30.33	30.0
Zm00001d017702_P001	Maize	peroxisome	30.33	29.21
HORVU5Hr1G060310.22	Barley	nucleus	35.25	29.05
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	29.51	28.8
TraesCS5A01G203200.1	Wheat	nucleus	35.25	28.48
TraesCS5D01G209600.1	Wheat	nucleus, plastid	34.43	28.06
TraesCS5B01G201900.1	Wheat	nucleus, plastid	34.43	27.94
Os02t0696900-00	Rice	plasma membrane	27.87	27.64
Zm00001d020384_P001	Maize	nucleus	36.61	26.48
Bra029503.1-P	Field mustard	mitochondrion	12.3	26.16
KXG35581	Sorghum	nucleus	36.34	25.43
Bra026202.1-P	Field mustard	nucleus	13.66	25.0
Bra026618.1-P	Field mustard	nucleus	15.3	21.37
Bra026818.1-P	Field mustard	nucleus	13.39	20.42
Bra024836.1-P	Field mustard	nucleus	13.93	19.69
Bra005124.1-P	Field mustard	nucleus	16.39	17.8
Bra035311.1-P	Field mustard	nucleus	28.14	16.51
Bra000180.1-P	Field mustard	nucleus	15.3	14.4
Bra004973.1-P	Field mustard	nucleus	15.85	14.25
Bra017425.1-P	Field mustard	nucleus	7.1	13.13
Bra006360.1-P	Field mustard	nucleus	24.32	12.14
Bra000270.1-P	Field mustard	nucleus	7.65	9.72
Bra017021.1-P	Field mustard	nucleus	4.64	4.67

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra023254	EnsemblPlants:Bra023254.1	EnsemblPlants:Bra023254.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:M4E3A3	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF10	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00025422E2
SEG:seg	:	:	:	:	:

Description

AT1G32240 (E=7e-109) KAN2 | KAN2 (KANADI 2); DNA binding / transcription factor

Coordinates

chrA09:+:20177576..20182854

Molecular Weight (calculated)

41474.1 Da

IEP (calculated)

7.745

GRAVY (calculated)

-0.940

Length

366 amino acids

Sequence
(BLAST)

001: MELFPAQPDL SLQISPPNSQ PSSTWQRRRP TTDQEDHEEL DLGFWRRALD SRTSSLVSNS SSKTTNNHHH PLEDLSLSNN SHRHHQQIFT SFQFPTQQQQ
101: HLQGFLAHDL NTHLRPIRGI PLYQNPPPHH HHRPPPCFPF DPSSLIPSSS PTPTGINNNS FGTSRVNPNH HNHHQTLNRA RFMPRFPAKR SMRAPRMRWT
201: TTLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDKAAASSG QSDVYENGSS GDNNSDDWMF DMNRKSRDTD ELTNPLEKSN
301: GRWTNSSGEA RLHGKLIDNV AEIILPSENE IDGKSSSYER MSSEDMSSSN ISGTSPFKPN LEFTLG

Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)

001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH

Arabidopsis Description

KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.