Factsheet for TraesCS6A01G007300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G011600.1	Wheat	nucleus	96.08	96.08
TraesCS6B01G012800.1	Wheat	nucleus	94.58	94.29
HORVU6Hr1G000410.1	Barley	nucleus	92.47	93.31
GSMUA_Achr1P23970_001	Banana	nucleus	34.04	55.12
KRH74367	Soybean	nucleus	35.24	42.39
CDX84102	Canola	nucleus	34.04	41.7
TraesCS7A01G298700.1	Wheat	nucleus	40.96	39.42
GSMUA_AchrUn_...	Banana	nucleus	39.16	38.01
KRH39575	Soybean	nucleus	42.47	36.15
Bra023254.1-P	Field mustard	nucleus	39.16	35.52
AT1G32240.1	Thale cress	nucleus	40.66	34.79
Bra033844.1-P	Field mustard	nucleus	39.46	33.42
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	34.34	32.11
PGSC0003DMT400034663	Potato	nucleus	39.76	29.33
Solyc11g011770.1.1	Tomato	nucleus	39.76	28.57
TraesCS5A01G203200.1	Wheat	nucleus	38.55	28.26
KRG97985	Soybean	nucleus	38.55	26.89
TraesCS5A01G064700.1	Wheat	nucleus	27.11	25.79
KRH30907	Soybean	nucleus	38.86	25.54
TraesCS4A01G242600.1	Wheat	nucleus	28.31	25.34
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	27.41	24.07
TraesCS7A01G469900.1	Wheat	nucleus	15.36	20.48
TraesCS7A01G470200.1	Wheat	nucleus	15.06	20.33
TraesCS7A01G470100.1	Wheat	nucleus	15.06	19.84
TraesCS2A01G402700.1	Wheat	nucleus	15.36	17.23
TraesCS5A01G153000.1	Wheat	nucleus	16.87	17.18
TraesCS6A01G254700.1	Wheat	nucleus	14.76	16.17
TraesCS4A01G180900.1	Wheat	nucleus	16.27	15.84
TraesCS1A01G202500.1	Wheat	nucleus	15.66	14.73
TraesCS5A01G496100.1	Wheat	nucleus	16.27	14.29
TraesCS6A01G109700.1	Wheat	nucleus	19.28	13.42
TraesCS7A01G345200.2	Wheat	nucleus	18.37	11.8

Protein Annotations

EnsemblPlants:TraesCS6A01G007300.1	EnsemblPlantsGene:TraesCS6A01G007300	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	InterPro:SANT/Myb	PANTHER:PTHR31496	PANTHER:PTHR31496:SF4
PFAM:PF00249	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	MapMan:15.5.2.3	:

Description

No Description!

Coordinates

chr6A:+:2925096..2929262

Molecular Weight (calculated)

35992.8 Da

IEP (calculated)

9.089

GRAVY (calculated)

-0.696

Length

332 amino acids

Sequence
(BLAST)

001: MELFPRQPDL ALQISTNSSS SSSPPTAPPG SWGRPPDATT GATSMDHFSH HLGFLRATDI TNKDGTPPLA WTPPPSAATA ASYSNHISNH YHHRMNALLK
101: PIRGVPIYHH HPSFQQLQHQ HMAMAYRSSG VGGGGGFLSS RSRFPPGRRS VRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS
201: HLQMYRTIKS TDKPMTSPGQ NEGFDNGSAG EISDESLPEA LNTHRGTDQN GTSANSHSSS SYNGGLWSNS SSRVGWPGLG TNSTENRGQC HKEADASKSL
301: EMSAEMNVSC ISDQTSSPPV PNLEFTLGRT HH

Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)

001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH

Arabidopsis Description

KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.