Factsheet for TraesCS5A01G496100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G323600.1	Wheat	nucleus	88.62	87.47
TraesCS4D01G320400.1	Wheat	nucleus	91.01	80.19
HORVU4Hr1G082560.1	Barley	plastid	76.98	76.18
Zm00001d048448_P001	Maize	nucleus	19.84	64.66
KXG40258	Sorghum	nucleus	48.68	45.32
TraesCS1A01G202500.1	Wheat	nucleus	39.42	42.21
Zm00001d027492_P001	Maize	mitochondrion	45.77	39.86
TraesCS7A01G470100.1	Wheat	nucleus	18.25	27.38
TraesCS7A01G470200.1	Wheat	nucleus	17.46	26.83
TraesCS7A01G469900.1	Wheat	nucleus	17.46	26.51
TraesCS2A01G402700.1	Wheat	nucleus	17.99	22.97
TraesCS6A01G254700.1	Wheat	nucleus	18.25	22.77
TraesCS5A01G153000.1	Wheat	nucleus	16.93	19.63
TraesCS4A01G180900.1	Wheat	nucleus	14.81	16.42
TraesCS6A01G007300.1	Wheat	nucleus	14.29	16.27
TraesCS5A01G064700.1	Wheat	nucleus	14.55	15.76
TraesCS7A01G298700.1	Wheat	nucleus	14.29	15.65
TraesCS6A01G109700.1	Wheat	nucleus	19.31	15.3
TraesCS4A01G242600.1	Wheat	nucleus	14.29	14.56
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	13.49	14.37
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	14.02	14.02
TraesCS7A01G345200.2	Wheat	nucleus	19.05	13.93
TraesCS5A01G203200.1	Wheat	nucleus	14.81	12.36

Protein Annotations

EnsemblPlants:TraesCS5A01G496100.1	EnsemblPlantsGene:TraesCS5A01G496100	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	PFAM:PF00249	PFscan:PS51294	SEG:seg	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	MapMan:15.5.2.3	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:663712627..663715365

Molecular Weight (calculated)

40266.0 Da

IEP (calculated)

9.841

GRAVY (calculated)

-0.541

Length

378 amino acids

Sequence
(BLAST)

001: MAPRTTREGS GGGGGRGGVR QYNRSKVPRL RWTSALHRCF VHAIHSLGGH DRATPKRVLQ VMGVGGLTIS HVKSHLQMYR NMRNDLGMQG MQQVQQSGQE
101: EHTRSTGGAM EVCTDDDGEC RLPGYGSPKP RKEPTTLPLH PQLKRRASET ETREEVSASP TSLLRVQGGG ICEGRGMSSS SSHVPAAAGG HYYVRMDMMQ
201: AHAVLQAPPM AAARLVEPRP SMPLGIKQKQ KHRREPWMPT TRLHRDGELA AASTLEFLGF LVAPGRHPPR PRAACCDGYP IEVGMPPNRP AAYTASRTDG
301: VRPCRPEPPG NVLDAGFTNL TLAGERDGGC SLSLALALCP AGGGGAESSL LSSSTASSSS SSSGSRISLD LSLSTHDS

Best Arabidopsis Sequence Match ( AT4G04605.1 )
(BLAST)

001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA

Arabidopsis Description

Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.