Factsheet for TraesCS5A01G064700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G075600.1	Wheat	nucleus	89.68	91.25
TraesCS5B01G068000.1	Wheat	nucleus	89.11	90.14
HORVU5Hr1G017410.10	Barley	nucleus	83.67	84.88
Zm00001d041376_P001	Maize	nucleus	21.49	48.7
Zm00001d030911_P001	Maize	cytosol	21.78	42.7
GSMUA_Achr4P32400_001	Banana	plastid	28.37	39.44
GSMUA_Achr10P...	Banana	nucleus	23.21	38.76
TraesCS4A01G242600.1	Wheat	nucleus	34.67	32.61
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	31.81	29.37
TraesCS6A01G007300.1	Wheat	nucleus	25.79	27.11
OQU79478	Sorghum	nucleus	35.82	27.06
TraesCS7A01G298700.1	Wheat	nucleus	25.5	25.8
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	25.21	24.79
TraesCS5A01G203200.1	Wheat	nucleus	29.23	22.52
TraesCS7A01G470100.1	Wheat	nucleus	13.47	18.65
TraesCS7A01G470200.1	Wheat	nucleus	12.61	17.89
TraesCS7A01G469900.1	Wheat	nucleus	12.61	17.67
TraesCS6A01G254700.1	Wheat	nucleus	14.61	16.83
TraesCS2A01G402700.1	Wheat	nucleus	14.04	16.55
TraesCS5A01G153000.1	Wheat	nucleus	15.19	16.26
TraesCS4A01G180900.1	Wheat	nucleus	15.47	15.84
TraesCS5A01G496100.1	Wheat	nucleus	15.76	14.55
TraesCS1A01G202500.1	Wheat	nucleus	14.04	13.88
TraesCS6A01G109700.1	Wheat	nucleus	18.34	13.42
TraesCS7A01G345200.2	Wheat	nucleus	16.33	11.03

Protein Annotations

EnsemblPlants:TraesCS5A01G064700.1	EnsemblPlantsGene:TraesCS5A01G064700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	InterPro:SANT/Myb	PANTHER:PTHR31496	PANTHER:PTHR31496:SF12
PFAM:PF00249	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	MapMan:15.5.2.3	:

Description

No Description!

Coordinates

chr5A:-:70172060..70178318

Molecular Weight (calculated)

37441.1 Da

IEP (calculated)

7.214

GRAVY (calculated)

-0.578

Length

349 amino acids

Sequence
(BLAST)

001: MSSPPPPPLP EACSITTAIA PDLSLHISPP LPDAVVGDDG EVRLGLHEVA SKRYRGLEEM LHQPNKAHGF KKSSCPAVGG SAVARPAAGG RKRSSRAPRM
101: RWTTALHAHF VRAVELLGGH ERATPKSVLE LMNVKDLTLA HVKSHLQMYR TVKGTERSCA AGHGQTRDMG FLRRVVAGDE LVNGFDGFNS NMVNTTSNNT
201: TPRRSESPAG EQGHHDAWGT QAAAAAAAAT TTMVPPYLTT SEPHDNEHMM PESGMARPAA PRRGRPSPNN TSSSGSDDVD ETESFGWLAL TRRRYDDGGD
301: GDCAGDRELQ GAAMVMDPSL EMRLGRQGWE QMEPSASASK ELTPILKCL

Best Arabidopsis Sequence Match ( AT5G42630.1 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.