Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G334100.1 | Wheat | nucleus | 82.4 | 82.4 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 83.17 | 82.06 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 80.66 | 81.6 |
| Os06t0543200-01 | Rice | nucleus | 58.03 | 55.25 |
| OQU76531 | Sorghum | nucleus | 53.0 | 53.52 |
| Zm00001d046174_P001 | Maize | nucleus | 48.94 | 47.65 |
| Zm00001d037015_P001 | Maize | nucleus | 49.32 | 46.03 |
| TraesCS6A01G109700.1 | Wheat | nucleus | 33.85 | 36.69 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 16.44 | 35.12 |
| PGSC0003DMT400011207 | Potato | nucleus | 15.28 | 33.33 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 22.63 | 30.95 |
| AT2G42660.1 | Thale cress | nucleus | 14.7 | 29.8 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 17.02 | 28.66 |
| PGSC0003DMT400026419 | Potato | nucleus | 18.76 | 27.87 |
| KRH11029 | Soybean | nucleus | 19.54 | 27.67 |
| KRH21258 | Soybean | nucleus | 19.73 | 27.35 |
| CDY42825 | Canola | nucleus | 17.21 | 27.22 |
| Solyc02g076670.2.1 | Tomato | nucleus | 17.6 | 26.92 |
| CDY67147 | Canola | nucleus | 17.02 | 26.91 |
| TraesCS7A01G470100.1 | Wheat | nucleus | 12.96 | 26.59 |
| TraesCS7A01G469900.1 | Wheat | nucleus | 12.38 | 25.7 |
| KRH27060 | Soybean | nucleus | 17.99 | 25.27 |
| KRH22274 | Soybean | nucleus | 17.8 | 24.93 |
| TraesCS5A01G153000.1 | Wheat | nucleus | 15.67 | 24.85 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 11.61 | 24.39 |
| KRH58975 | Soybean | nucleus | 18.76 | 24.19 |
| KRH42874 | Soybean | nucleus | 18.76 | 24.13 |
| TraesCS2A01G402700.1 | Wheat | nucleus | 13.15 | 22.97 |
| TraesCS4A01G180900.1 | Wheat | nucleus | 14.89 | 22.58 |
| Bra000270.1-P | Field mustard | nucleus | 11.03 | 19.79 |
| TraesCS6A01G254700.1 | Wheat | nucleus | 11.41 | 19.47 |
| TraesCS1A01G202500.1 | Wheat | nucleus | 13.15 | 19.26 |
| TraesCS5A01G496100.1 | Wheat | nucleus | 13.93 | 19.05 |
| TraesCS6A01G007300.1 | Wheat | nucleus | 11.8 | 18.37 |
| TraesCS7A01G298700.1 | Wheat | nucleus | 11.8 | 17.68 |
| TraesCS6A01G266400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 11.22 | 16.34 |
| TraesCS5A01G064700.1 | Wheat | nucleus | 11.03 | 16.33 |
| TraesCS5A01G402800.1 | Wheat | mitochondrion, plastid | 11.41 | 15.61 |
| TraesCS4A01G242600.1 | Wheat | nucleus | 10.25 | 14.29 |
| TraesCS5A01G203200.1 | Wheat | nucleus | 11.41 | 13.02 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G345200.2 | EnsemblPlantsGene:TraesCS7A01G345200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | InterPro:SANT/Myb |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF42 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | MapMan:15.5.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:507171663..507178878
Molecular Weight (calculated)
56413.6 Da
IEP (calculated)
9.915
GRAVY (calculated)
-0.787
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVKEKEAL AKVLEDHRKG SSDDDSPPPA GLDLNEGFSE ASDDGEDGEE NYDDDGGSTS EVAGGGRSSS NNNSANHESE SSRGHRDKAE GSGERVPTVR
101: QYNRSKHPRL RWTPDLHMAF LHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKIEHESSH ERAAMSSVFS PMNFHMRRGD HPFHDMFFQR
201: AAAGSTLSSR FNDNGGVFAP RNAGLPDASR IYGLLQRRQP PLQTFDFKNS TSLRNQEWAF TQHAVAARAR AVNDNGLGKG LIREMIFRKD GKPTSHLFDV
301: RDAVASNGTS SPSTSTSPAD RRSDGAKIGS INWIGSSSRP LSKAMSATGL EQGGHAQLPF RWRGAAGSNG CHPNGNPGRT TSPSDPVVTR EAGSPLLLPK
401: QGMPRAPAEE TSIGAEARRT KTSATAEENG WAPELQLSLS PNAVADTAGR GKKRNSAGQE VSSDKVLFRT TAMIRSWSLL TQTEAREHLV TGSFRWEMVA
501: QDIFNRFGWR SCNRIGM
101: QYNRSKHPRL RWTPDLHMAF LHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKIEHESSH ERAAMSSVFS PMNFHMRRGD HPFHDMFFQR
201: AAAGSTLSSR FNDNGGVFAP RNAGLPDASR IYGLLQRRQP PLQTFDFKNS TSLRNQEWAF TQHAVAARAR AVNDNGLGKG LIREMIFRKD GKPTSHLFDV
301: RDAVASNGTS SPSTSTSPAD RRSDGAKIGS INWIGSSSRP LSKAMSATGL EQGGHAQLPF RWRGAAGSNG CHPNGNPGRT TSPSDPVVTR EAGSPLLLPK
401: QGMPRAPAEE TSIGAEARRT KTSATAEENG WAPELQLSLS PNAVADTAGR GKKRNSAGQE VSSDKVLFRT TAMIRSWSLL TQTEAREHLV TGSFRWEMVA
501: QDIFNRFGWR SCNRIGM
001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
Arabidopsis Description
Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.