Factsheet for HORVU7Hr1G080530.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G334100.1	Wheat	nucleus	91.0	89.94
TraesCS7B01G238000.1	Wheat	nucleus	91.0	88.74
TraesCS7A01G345200.2	Wheat	nucleus	81.6	80.66
Os06t0543200-01	Rice	nucleus	63.99	60.22
OQU76531	Sorghum	nucleus	57.14	57.03
Zm00001d046174_P001	Maize	nucleus	53.23	51.22
Zm00001d037015_P001	Maize	nucleus	53.62	49.46
HORVU6Hr1G019650.5	Barley	nucleus	35.62	37.92
VIT_12s0028g02080.t01	Wine grape	nucleus	16.44	34.71
HORVU7Hr1G107500.1	Barley	mitochondrion	4.89	33.33
PGSC0003DMT400011207	Potato	nucleus	14.68	31.65
AT2G42660.1	Thale cress	nucleus	15.66	31.37
CDY42825	Canola	nucleus	18.59	29.05
Solyc03g006150.2.1	Tomato	extracellular, nucleus	17.22	28.66
GSMUA_Achr7P09370_001	Banana	nucleus	21.14	28.57
CDY67147	Canola	nucleus	18.2	28.44
KRH11029	Soybean	nucleus	20.16	28.22
KRH21258	Soybean	nucleus	20.35	27.88
HORVU7Hr1G107670.1	Barley	nucleus	13.5	27.82
PGSC0003DMT400026419	Potato	nucleus	18.79	27.59
Solyc02g076670.2.1	Tomato	nucleus	17.61	26.63
KRH27060	Soybean	nucleus	18.79	26.09
KRH22274	Soybean	nucleus	18.4	25.47
HORVU7Hr1G107680.8	Barley	nucleus	12.92	25.29
HORVU2Hr1G095530.2	Barley	nucleus	14.29	24.33
KRH58975	Soybean	nucleus	18.98	24.19
KRH42874	Soybean	nucleus	18.98	24.13
HORVU1Hr1G052170.2	Barley	nucleus	11.94	23.83
HORVU7Hr1G070420.2	Barley	nucleus	7.44	22.75
Bra000270.1-P	Field mustard	nucleus	12.33	21.88
HORVU6Hr1G064920.1	Barley	mitochondrion	9.2	19.92
HORVU4Hr1G082560.1	Barley	plastid	14.87	19.9
HORVU0Hr1G016420.1	Barley	mitochondrion	9.0	19.49
HORVU6Hr1G000410.1	Barley	nucleus	12.33	19.15
HORVU7Hr1G107630.5	Barley	mitochondrion	9.98	18.82
HORVU5Hr1G017410.10	Barley	nucleus	11.74	17.44
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	12.72	16.93
HORVU4Hr1G012040.5	Barley	nucleus	12.33	16.89
HORVU5Hr1G060310.22	Barley	nucleus	11.35	13.06

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A287X218	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G080530	EnsemblPlants:HORVU7Hr1G080530.3	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF42	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI000B473539	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:477251434..477254032

Molecular Weight (calculated)

55005.9 Da

IEP (calculated)

8.696

GRAVY (calculated)

-0.735

Length

511 amino acids

Sequence
(BLAST)

001: MGEVKEKEAL AEILEDHRKG SSDDSVPRAG LDLNEGFSEE SDQGEDGEEN DDDDGRSSSN NNSANHESES SRGRHDKAEG SGDRVPTVRQ YNRSKHPRLR
101: WTPDLHMAFL HAVERLGGQE RATPKLVLQM MNVRGLSIAH VKSHLQMYRS KKIEHESSHE RAAISSGYWP MNFHMRRGDH PFHDMFFQRA AGSTLSSRFN
201: DGGVFAPRNA ALPDASRIYG LLQRRQPPLQ TFDFKNSTSL RNQEWAFSQH AAAARARAVN DNGPGKGLIH EMIFRKDGKP TAHLFDVRDV VAPSGMSSPS
301: TTTTSPADLR SDGPKIGSIN WIGSSSRPLS KTMSATGLEQ GVHAQLPFRW RGAAGSNGCH PNGNTAGRTT SSSDPVVTCA AGSPLLLPKQ GVPRAPAKAT
401: EETSIGAEAR RTKTSAAVEE NGWTPELQLS LSPNAGADTG GRGKKRNSAG QEVSSDKVPL SLSLALHGGV VDDDGGGRDG RRLEVATGSS SKKAALGLST
501: LDLTMSIKAL E

Best Arabidopsis Sequence Match ( AT2G40260.1 )
(BLAST)

001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.