Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G064920.1 | Barley | mitochondrion | 99.58 | 99.58 |
| TraesCS6D01G236000.1 | Wheat | mitochondrion | 63.98 | 49.67 |
| TraesCS6B01G270800.1 | Wheat | nucleus | 65.68 | 48.74 |
| TraesCS6A01G254700.1 | Wheat | nucleus | 59.75 | 46.53 |
| HORVU7Hr1G107500.1 | Barley | mitochondrion | 11.02 | 34.67 |
| HORVU7Hr1G107680.8 | Barley | nucleus | 20.76 | 18.77 |
| HORVU2Hr1G095530.2 | Barley | nucleus | 23.31 | 18.33 |
| HORVU7Hr1G107670.1 | Barley | nucleus | 19.07 | 18.15 |
| HORVU1Hr1G052170.2 | Barley | nucleus | 19.07 | 17.58 |
| KXG31083 | Sorghum | nucleus | 23.31 | 17.19 |
| Zm00001d017563_P002 | Maize | nucleus | 23.31 | 15.9 |
| HORVU7Hr1G070420.2 | Barley | nucleus | 11.02 | 15.57 |
| HORVU7Hr1G107630.5 | Barley | mitochondrion | 15.68 | 13.65 |
| HORVU5Hr1G017410.10 | Barley | nucleus | 19.07 | 13.08 |
| HORVU4Hr1G082560.1 | Barley | plastid | 20.34 | 12.57 |
| HORVU6Hr1G000410.1 | Barley | nucleus | 17.37 | 12.46 |
| HORVU4Hr1G012040.5 | Barley | nucleus | 19.49 | 12.33 |
| HORVU5Hr1G097900.4 | Barley | mitochondrion, plastid | 17.37 | 10.68 |
| HORVU6Hr1G019650.5 | Barley | nucleus | 19.49 | 9.58 |
| HORVU5Hr1G060310.22 | Barley | nucleus | 17.37 | 9.23 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 19.49 | 9.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | UniProt:A0A287E358 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU0Hr1G016420 | EnsemblPlants:HORVU0Hr1G016420.1 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | PFAM:PF00249 | PANTHER:PTHR31314 |
| PANTHER:PTHR31314:SF2 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000B4675BA | SEG:seg |
Description
No Description!
Coordinates
chrchrUn:-:88349451..88350731
Molecular Weight (calculated)
26228.7 Da
IEP (calculated)
11.433
GRAVY (calculated)
-0.558
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKQEAWRR GGFVRRYTRS SVPRMRWTAE LESGFVRAVD PLGSRDSAKV TPKRILELMD VQGLTISHVK SHLQMYRCTP HGNKGKQGGG GAKNPCAFLP
101: AEMQPQLGLK NHPFATDERG SEGLTFPPMK RFFAPTRLRA KLLDFHVKKQ ALITHFGRPF FSLSLFSGSR VDRSKAGAET AASCKSMQGN SDTRVMIPGN
201: RRCIDDYLQQ HAMSSVGRMR NVNEGLRRHS AAAAAA
101: AEMQPQLGLK NHPFATDERG SEGLTFPPMK RFFAPTRLRA KLLDFHVKKQ ALITHFGRPF FSLSLFSGSR VDRSKAGAET AASCKSMQGN SDTRVMIPGN
201: RRCIDDYLQQ HAMSSVGRMR NVNEGLRRHS AAAAAA
001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
Arabidopsis Description
Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.