Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G372200.1 | Wheat | nucleus | 64.58 | 71.43 |
| TraesCS7D01G457600.1 | Wheat | nucleus | 64.21 | 70.45 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 63.47 | 69.92 |
| TraesCS7D01G457500.1 | Wheat | nucleus | 55.35 | 60.98 |
| HORVU7Hr1G107680.8 | Barley | nucleus | 56.83 | 59.0 |
| TraesCSU01G097800.1 | Wheat | plastid | 42.07 | 58.46 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 51.29 | 57.92 |
| HORVU7Hr1G107670.1 | Barley | nucleus | 42.44 | 46.37 |
| OQU76857 | Sorghum | nucleus | 42.44 | 44.92 |
| Os06t0670300-01 | Rice | nucleus | 40.59 | 42.97 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 11.07 | 41.67 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 13.65 | 33.95 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 10.7 | 32.22 |
| HORVU7Hr1G107500.1 | Barley | mitochondrion | 7.75 | 28.0 |
| KRH14524 | Soybean | nucleus | 19.19 | 27.81 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 15.87 | 27.22 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 19.56 | 25.73 |
| KRH73595 | Soybean | nucleus | 19.93 | 25.35 |
| Solyc12g006280.1.1 | Tomato | nucleus | 15.5 | 24.14 |
| PGSC0003DMT400002410 | Potato | nucleus | 19.19 | 24.07 |
| Solyc07g045000.2.1 | Tomato | nucleus | 11.81 | 18.18 |
| HORVU7Hr1G070420.2 | Barley | nucleus | 11.07 | 17.96 |
| HORVU1Hr1G052170.2 | Barley | nucleus | 16.24 | 17.19 |
| HORVU2Hr1G095530.2 | Barley | nucleus | 18.08 | 16.33 |
| HORVU6Hr1G064920.1 | Barley | mitochondrion | 13.65 | 15.68 |
| HORVU0Hr1G016420.1 | Barley | mitochondrion | 13.65 | 15.68 |
| HORVU4Hr1G082560.1 | Barley | plastid | 21.4 | 15.18 |
| HORVU6Hr1G000410.1 | Barley | nucleus | 14.76 | 12.16 |
| HORVU6Hr1G019650.5 | Barley | nucleus | 21.4 | 12.08 |
| HORVU5Hr1G017410.10 | Barley | nucleus | 14.39 | 11.34 |
| HORVU4Hr1G012040.5 | Barley | nucleus | 15.13 | 10.99 |
| HORVU7Hr1G080530.3 | Barley | nucleus | 18.82 | 9.98 |
| HORVU5Hr1G097900.4 | Barley | mitochondrion, plastid | 13.65 | 9.64 |
| HORVU5Hr1G060310.22 | Barley | nucleus | 14.39 | 8.78 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.2 | UniProt:A0A287XQD6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:HORVU7Hr1G107630 | EnsemblPlants:HORVU7Hr1G107630.5 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF2 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | TMHMM:TMhelix | UniParc:UPI000B466491 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:623451989..623453969
Molecular Weight (calculated)
30001.8 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.212
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKILKKLIF RNEGNSIIYI LRTYILYLPF ISALVATQPR VPFFFISSRP VDELLLTPIL FTYLVCAEAT PKRILQLMGV KGVSISHIKS HLQMYRSSSS
101: GGSSNPPHTP VNRRQDRCCI DGNITATSAS DMIDVPSYPV FRHGHHSMSR PCQIPSIEEV FRTWEQSRGR LQWDSSGMLN TTLQEIGSSC HADGKTCQKK
201: QQVTTGCDLT LSIGRWEEEE ASSDADISST TTEESAVPAR GQGAGGHCHP EASVDLNLDL NLDLAISSSW L
101: GGSSNPPHTP VNRRQDRCCI DGNITATSAS DMIDVPSYPV FRHGHHSMSR PCQIPSIEEV FRTWEQSRGR LQWDSSGMLN TTLQEIGSSC HADGKTCQKK
201: QQVTTGCDLT LSIGRWEEEE ASSDADISST TTEESAVPAR GQGAGGHCHP EASVDLNLDL NLDLAISSSW L
001: MQDPMVRSYI RSDNPRMHWT DDLDIRFIQV IEKLGGEESA TPKRILSLMG VRDLTISHVK SHLQMYRNKK KEESSKEIKM MREMTQRQSQ QYLQIYERAT
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XEB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.