Factsheet for HORVU2Hr1G095530.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G402700.1	Wheat	nucleus	82.0	83.11
TraesCS2D01G400100.2	Wheat	mitochondrion, nucleus	80.0	82.19
TraesCS2B01G420900.1	Wheat	mitochondrion, nucleus	78.0	79.86
Os04t0566600-01	Rice	extracellular	59.67	58.5
EES11274	Sorghum	nucleus	57.0	54.81
Zm00001d002649_P001	Maize	nucleus	55.0	50.3
Zm00001d026106_P001	Maize	nucleus	54.0	47.23
HORVU7Hr1G107500.1	Barley	mitochondrion	7.33	29.33
HORVU7Hr1G107670.1	Barley	nucleus	20.67	25.0
HORVU0Hr1G016420.1	Barley	mitochondrion	18.33	23.31
HORVU6Hr1G064920.1	Barley	mitochondrion	18.33	23.31
HORVU7Hr1G107680.8	Barley	nucleus	20.0	22.99
HORVU7Hr1G070420.2	Barley	nucleus	12.33	22.16
HORVU1Hr1G052170.2	Barley	nucleus	17.67	20.7
HORVU4Hr1G082560.1	Barley	plastid	23.67	18.59
HORVU7Hr1G107630.5	Barley	mitochondrion	16.33	18.08
HORVU6Hr1G000410.1	Barley	nucleus	17.33	15.81
HORVU4Hr1G012040.5	Barley	nucleus	19.33	15.55
HORVU7Hr1G080530.3	Barley	nucleus	24.33	14.29
HORVU5Hr1G017410.10	Barley	nucleus	16.0	13.95
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	17.0	13.28
HORVU6Hr1G019650.5	Barley	nucleus	21.0	13.12
HORVU5Hr1G060310.22	Barley	nucleus	16.67	11.26

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G095530
EnsemblPlants:HORVU2Hr1G095530.2	InterPro:Homeobox-like_sf	UniProt:M0Y9Q4	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31314
PANTHER:PTHR31314:SF6	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002950FC2	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:670392892..670396591

Molecular Weight (calculated)

32545.7 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.633

Length

300 amino acids

Sequence
(BLAST)

001: MWSSVKKQQE PVRRYVRSRV PRMQWTAELH SSFLQAIESL GGEPNATPKR VLEAMGVKEL TISHVKSHLQ MYRGPSTRKD KKEAQPQPQP LQRRHSCAAD
101: EQGCGGPKPF MCPPLKRART TGTVAAHKGM QGSKGISETK TSGAANQYCI DDYMQAMAME RRIKEEGLSG WQRDAAPAAA VSSLQTVGCL EQGSALAGDF
201: KQIIKPEARY CYPGLAVKKQ DLKEEKPEKD SSGTEQCALS LSLGTDPKCF RAVSSSSPSE GSCIISSSPP RRSSSHCSGH SGYLDAQGVN LELSLSICGS

Best Arabidopsis Sequence Match ( AT4G04580.1 )
(BLAST)

001: MQDPMVRSYI RSDNPRMHWT DDLDIRFIQV IEKLGGEESA TPKRILSLMG VRDLTISHVK SHLQMYRNKK KEESSKEIKM MREMTQRQSQ QYLQIYERAT
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XEB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.