Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G402700.1 | Wheat | nucleus | 89.42 | 88.51 |
| TraesCS2D01G400100.2 | Wheat | mitochondrion, nucleus | 85.67 | 85.96 |
| HORVU2Hr1G095530.2 | Barley | nucleus | 79.86 | 78.0 |
| Os04t0566600-01 | Rice | extracellular | 59.04 | 56.54 |
| EES11274 | Sorghum | nucleus | 58.02 | 54.49 |
| Zm00001d002649_P001 | Maize | nucleus | 55.29 | 49.39 |
| Zm00001d026106_P001 | Maize | nucleus | 53.58 | 45.77 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 20.82 | 24.9 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 19.45 | 23.75 |
| TraesCS7B01G372000.1 | Wheat | nucleus | 20.14 | 23.6 |
| TraesCS6B01G270800.1 | Wheat | nucleus | 23.21 | 21.38 |
| TraesCS5B01G151800.1 | Wheat | nucleus | 21.84 | 18.99 |
| TraesCS1B01G216600.1 | Wheat | nucleus | 22.53 | 18.75 |
| TraesCS4B01G323600.1 | Wheat | nucleus | 23.89 | 18.28 |
| TraesCS4B01G136900.1 | Wheat | nucleus | 20.82 | 17.99 |
| TraesCS4B01G072500.1 | Wheat | nucleus | 19.45 | 15.36 |
| TraesCS6B01G012800.1 | Wheat | nucleus | 17.41 | 15.32 |
| TraesCS7B01G200700.1 | Wheat | nucleus, plastid | 17.06 | 14.41 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 25.26 | 14.12 |
| TraesCS5B01G068000.1 | Wheat | nucleus | 16.04 | 13.62 |
| TraesCS6B01G293700.1 | Wheat | nucleus | 16.38 | 13.52 |
| TraesCS5B01G407600.1 | Wheat | plastid | 17.41 | 13.39 |
| TraesCS6B01G138200.1 | Wheat | nucleus | 21.16 | 11.74 |
| TraesCS5B01G201900.1 | Wheat | nucleus, plastid | 16.04 | 10.42 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G420900.1 | EnsemblPlantsGene:TraesCS2B01G420900 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | InterPro:SANT/Myb | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF6 |
| PFAM:PF00249 | SEG:seg | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2B:-:603919298..603922284
Molecular Weight (calculated)
31627.8 Da
IEP (calculated)
8.972
GRAVY (calculated)
-0.455
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSVKKQEA VRRYVRSRAP RMQWTAELHR SFLQAIECLG GEHNATPKLV LQVMGVKELT ISHVKSHLQM YRGPSTRKAK KETEAQLLQR RHSCAADEQQ
101: GGGPKPFMCP PLKRVRTGAG TEAAHEAGMQ GGQGISGMMT SGAVNQYSID DYYYMQAMAM QRRIMEGLSC QRDAAAAAAS SLQTVACLEQ GSGDFKIIKP
201: EAHYYPGLVV KKLDPKEDSN GAEQCSLSLS LGLDPRCFRA AVSSSSPSEG SCIISSSSPP PPRRRSSSHY SGHSGCFDAQ GINLELSLSI CGS
101: GGGPKPFMCP PLKRVRTGAG TEAAHEAGMQ GGQGISGMMT SGAVNQYSID DYYYMQAMAM QRRIMEGLSC QRDAAAAAAS SLQTVACLEQ GSGDFKIIKP
201: EAHYYPGLVV KKLDPKEDSN GAEQCSLSLS LGLDPRCFRA AVSSSSPSEG SCIISSSSPP PPRRRSSSHY SGHSGCFDAQ GINLELSLSI CGS
001: MQDPMVRSYI RSDNPRMHWT DDLDIRFIQV IEKLGGEESA TPKRILSLMG VRDLTISHVK SHLQMYRNKK KEESSKEIKM MREMTQRQSQ QYLQIYERAT
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XEB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.