Factsheet for TraesCS1B01G216600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G205800.1	Wheat	nucleus	96.31	96.31
TraesCS1A01G202500.1	Wheat	nucleus	91.76	91.5
HORVU1Hr1G052170.2	Barley	nucleus	65.91	90.62
TraesCS4B01G323600.1	Wheat	nucleus	42.33	38.9
TraesCS7B01G372000.1	Wheat	nucleus	19.32	27.2
TraesCS7B01G372100.1	Wheat	nucleus	18.18	26.67
TraesCS7B01G372200.1	Wheat	nucleus	18.47	26.53
TraesCS2B01G420900.1	Wheat	mitochondrion, nucleus	18.75	22.53
TraesCS6B01G270800.1	Wheat	nucleus	18.47	20.44
TraesCS5B01G151800.1	Wheat	nucleus	19.03	19.88
TraesCS4B01G136900.1	Wheat	nucleus	17.9	18.58
TraesCS6B01G012800.1	Wheat	nucleus	15.34	16.22
TraesCS5B01G407600.1	Wheat	plastid	16.19	14.96
TraesCS4B01G072500.1	Wheat	nucleus	15.62	14.82
TraesCS7B01G238000.1	Wheat	nucleus	21.59	14.5
TraesCS5B01G068000.1	Wheat	nucleus	14.2	14.49
TraesCS7B01G200700.1	Wheat	nucleus, plastid	14.2	14.41
TraesCS6B01G293700.1	Wheat	nucleus	14.49	14.37
TraesCS6B01G138200.1	Wheat	nucleus	20.74	13.83
TraesCS5B01G201900.1	Wheat	nucleus, plastid	14.77	11.53

Protein Annotations

EnsemblPlants:TraesCS1B01G216600.1	EnsemblPlantsGene:TraesCS1B01G216600	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	PFAM:PF00249	PFscan:PS51294	SEG:seg	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:392457649..392460749

Molecular Weight (calculated)

38357.2 Da

IEP (calculated)

8.439

GRAVY (calculated)

-0.693

Length

352 amino acids

Sequence
(BLAST)

001: MTMAAGRDQR VEGVRQYNRS RVPRLRWTPD LHRCFVHAIH TLGGQYRATP KRVLQLMGVA GLTISHVKSH LQMYRNMRGN DLDMMQGIQQ MDQEHTFAGG
101: GMEVWTDMQQ VHHHSEYCDG PYCRCHSTKH TKGSLLHHPQ LKRPSEMETA HESGASPQKN LVIRGQGICE RDVTSGTYVL AAAGQAYYYS HCMQTTTTTH
201: EQGHHLPPRS RTWQRTPAAG GGGEQSACPG CTPAPRERER DLAAPRRGAG GDLAPYCEER SGELVHGHHG VAPASHGRPR GTAAERADGE PSLSLTLELD
301: SGRLGGSGAG QCRTDVSEQG SFLTSSAASL CGSCSGRRRG GVSLDLSLSL YN

Best Arabidopsis Sequence Match ( AT2G02060.1 )
(BLAST)

001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.