Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G266400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 98.59 | 98.59 |
| TraesCS6D01G248300.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 97.75 | 97.2 |
| KXG30956 | Sorghum | cytosol, nucleus, peroxisome, plastid | 70.14 | 67.3 |
| Zm00001d017702_P001 | Maize | peroxisome | 66.76 | 62.37 |
| Zm00001d051527_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 65.35 | 61.87 |
| Os02t0696900-00 | Rice | plasma membrane | 63.66 | 61.25 |
| VIT_16s0039g01900.t01 | Wine grape | nucleus | 32.11 | 35.29 |
| TraesCS6B01G012800.1 | Wheat | nucleus | 32.96 | 35.14 |
| KRH74367 | Soybean | nucleus | 26.76 | 34.42 |
| CDX84102 | Canola | nucleus | 25.92 | 33.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.01 | 31.69 |
| KRH39575 | Soybean | nucleus | 34.08 | 31.03 |
| TraesCS7B01G200700.1 | Wheat | nucleus, plastid | 30.14 | 30.84 |
| Bra023254.1-P | Field mustard | nucleus | 31.55 | 30.6 |
| AT1G32240.1 | Thale cress | nucleus | 32.39 | 29.64 |
| Bra033844.1-P | Field mustard | nucleus | 32.39 | 29.34 |
| TraesCS4B01G072500.1 | Wheat | nucleus | 28.17 | 26.95 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 26.76 | 26.76 |
| TraesCS5B01G068000.1 | Wheat | nucleus | 25.63 | 26.38 |
| TraesCS5B01G407600.1 | Wheat | plastid | 27.89 | 25.98 |
| PGSC0003DMT400034663 | Potato | nucleus | 30.99 | 24.44 |
| KRG97985 | Soybean | nucleus | 32.39 | 24.16 |
| Solyc11g011770.1.1 | Tomato | nucleus | 31.27 | 24.03 |
| KRH30907 | Soybean | nucleus | 32.96 | 23.17 |
| TraesCS5B01G201900.1 | Wheat | nucleus, plastid | 29.3 | 23.06 |
| TraesCS7B01G372100.1 | Wheat | nucleus | 13.52 | 20.0 |
| TraesCS7B01G372000.1 | Wheat | nucleus | 13.8 | 19.6 |
| TraesCS7B01G372200.1 | Wheat | nucleus | 13.52 | 19.59 |
| TraesCS2B01G420900.1 | Wheat | mitochondrion, nucleus | 13.52 | 16.38 |
| TraesCS6B01G270800.1 | Wheat | nucleus | 14.65 | 16.35 |
| TraesCS5B01G151800.1 | Wheat | nucleus | 15.21 | 16.02 |
| TraesCS1B01G216600.1 | Wheat | nucleus | 14.37 | 14.49 |
| TraesCS4B01G136900.1 | Wheat | nucleus | 13.8 | 14.45 |
| TraesCS4B01G323600.1 | Wheat | nucleus | 14.93 | 13.84 |
| TraesCS7B01G238000.1 | Wheat | nucleus | 16.34 | 11.07 |
| TraesCS6B01G138200.1 | Wheat | nucleus | 15.77 | 10.61 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G293700.1 | EnsemblPlantsGene:TraesCS6B01G293700 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | InterPro:SANT/Myb | PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 |
| PFAM:PF00249 | SEG:seg | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | MapMan:15.5.2.3 | : |
Description
No Description!
Coordinates
chr6B:+:527928973..527933387
Molecular Weight (calculated)
37995.7 Da
IEP (calculated)
8.204
GRAVY (calculated)
-0.383
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MELFPSHPDL QPQLQISPPP ATKPMDLGFW KRALDTTAAA AAATSASAAA TFTPPSIART YPSAPAAAGG GFHAAHYGVA DGHLGGLQFL QHTQPILHEV
101: QDLAAMKPIR GIPVYNTSQS LPFLQSQLHH HNHHHQHCYD AIGGAAGGPR SPGKVGALRL AAPPAKRNSR APRMRWTTSL HARFVHAVEL LGGHERATPK
201: SVLELMDVKD LTLAHVKSHL QMYRTIKTTD HKPAAASSYG QAKTIIDIPD DSSFDIANTS GSESSVQQSN LDGNEHGSNM CALWSNNSSR GAWSFHGKSR
301: SDANPGDIKS FEDVQSQCPN VVADDAADLM SAPFRLSELV VGAKKPNLDF TLGRM
101: QDLAAMKPIR GIPVYNTSQS LPFLQSQLHH HNHHHQHCYD AIGGAAGGPR SPGKVGALRL AAPPAKRNSR APRMRWTTSL HARFVHAVEL LGGHERATPK
201: SVLELMDVKD LTLAHVKSHL QMYRTIKTTD HKPAAASSYG QAKTIIDIPD DSSFDIANTS GSESSVQQSN LDGNEHGSNM CALWSNNSSR GAWSFHGKSR
301: SDANPGDIKS FEDVQSQCPN VVADDAADLM SAPFRLSELV VGAKKPNLDF TLGRM
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.