CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97985	Soybean	nucleus	87.52	92.86
KRH17301	Soybean	nucleus	62.18	67.67
KRH72942	Soybean	nucleus	61.98	67.17
PGSC0003DMT400034663	Potato	nucleus	51.29	57.56
Solyc11g011770.1.1	Tomato	nucleus	50.3	54.98
GSMUA_Achr1P23970_001	Banana	nucleus	20.79	51.22
GSMUA_Achr2P18070_001	Banana	nucleus	26.53	49.81
GSMUA_Achr11P...	Banana	nucleus	23.17	49.37
GSMUA_AchrUn_...	Banana	nucleus	30.3	47.08
GSMUA_Achr9P23320_001	Banana	nucleus	20.79	46.46
GSMUA_Achr8P30770_001	Banana	nucleus	32.28	45.92
Os09t0395300-01	Rice	nucleus	34.26	45.89
HORVU5Hr1G060310.22	Barley	nucleus	40.0	45.5
KRH74367	Soybean	nucleus	24.75	45.29
TraesCS5D01G209600.1	Wheat	nucleus, plastid	39.8	44.77
TraesCS5B01G201900.1	Wheat	nucleus, plastid	39.8	44.57
TraesCS5A01G203200.1	Wheat	nucleus	39.8	44.37
GSMUA_Achr3P00380_001	Banana	nucleus	21.58	41.6
Zm00001d020384_P001	Maize	nucleus	41.19	41.11
KRH15279	Soybean	mitochondrion	15.45	40.41
KRH39575	Soybean	nucleus	30.89	40.0
HORVU6Hr1G000410.1	Barley	nucleus	25.54	39.21
KXG35581	Sorghum	nucleus	40.59	39.2
GSMUA_AchrUn_...	Banana	nucleus	24.16	38.98
TraesCS6A01G007300.1	Wheat	nucleus	25.54	38.86
TraesCS6D01G011600.1	Wheat	nucleus	25.35	38.55
TraesCS6B01G012800.1	Wheat	nucleus	24.95	37.84
GSMUA_AchrUn_...	Banana	nucleus	25.35	37.43
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	29.31	35.84
KRH39002	Soybean	nucleus	29.11	35.68
KRH48713	Soybean	nucleus	28.91	35.1
KRH05752	Soybean	nucleus	22.38	34.14
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	23.17	32.96
TraesCS6B01G293700.1	Wheat	nucleus	23.17	32.96
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	23.17	32.77
GSMUA_AchrUn_...	Banana	nucleus	25.54	32.58
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	22.57	30.81
Os02t0696900-00	Rice	plasma membrane	22.38	30.62
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	22.57	30.4
KRH51927	Soybean	nucleus	19.8	30.3
KRH61226	Soybean	nucleus	19.6	29.91
Zm00001d017702_P001	Maize	peroxisome	21.98	29.21
KRH14524	Soybean	nucleus	8.91	24.06
KRG99004	Soybean	nucleus	8.91	21.63
KRH73595	Soybean	nucleus	8.71	20.66
KRH36473	Soybean	nucleus	10.89	19.43
KRH11454	Soybean	nucleus	10.89	19.16
KRH11029	Soybean	nucleus	12.67	17.53
KRH21258	Soybean	nucleus	12.87	17.43
KRG89170	Soybean	nucleus	10.1	17.35
KRH49492	Soybean	nucleus	10.3	17.33
KRG90693	Soybean	nucleus	10.3	17.16
KRH75999	Soybean	nucleus	10.69	15.74
KRH22274	Soybean	nucleus	11.49	15.72
KRH58975	Soybean	nucleus	12.48	15.71
KRH42874	Soybean	nucleus	12.48	15.67
KRH27060	Soybean	nucleus	11.29	15.49
KRH65638	Soybean	nucleus	10.3	15.03
KRH00305	Soybean	nucleus	10.49	14.36
KRH49433	Soybean	nucleus	10.3	14.21
KRH36060	Soybean	nucleus	4.95	10.25
KRH45989	Soybean	nucleus	2.57	8.07

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100813413	MapMan:15.5.2.3	EMBL:ACUP02007099	EnsemblPlantsGene:GLYMA_11G213700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:K7LRG7	EnsemblPlants:KRH30907
ProteinID:KRH30907	ProteinID:KRH30907.1	InterPro:Myb_dom_plants	PFAM:PF00249	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI00029596A0	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:30694022..30700776

Molecular Weight (calculated)

54558.0 Da

IEP (calculated)

8.173

GRAVY (calculated)

-0.719

Length

505 amino acids

Sequence
(BLAST)

001: MPLEGIFIEP TSTSIPDLSL HISPPSTSSF SSLICSNNNN NNNTSGGGGG INYEAHNSRS TNFPSQAHTE LSLGRNFSVG GGGRGGGALE EPPPHNNNIN
101: NNPYYQTQKA HLQHLHQHHS NASRATTSTT TSSSNHMSHI NYGVSLLDVS SEGMRPIKGI PVYHNRSFPF LPLEHSRSDK DHHAKMCLYH HMPTYPSLSS
201: SCSPLCPSSS SSSPAAPYFV ATAATAGGLD PMSYLSCSGG TTNPAAHRAA TATRFNGFSG EAFKSHHPLH HHHHSSSSSS SPQYGVGPGP SHHEVSSGLM
301: RSRFLPKLPA KRSMRAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKTTDKPAAS SGLSDGSGED DMSPMGSSGG
401: MRQFSDQRSL SDRPVQQDMD YSSANNTLWS NSSSSREPWQ QNNSNDIDGF RPPIFQSQQI SGGHQIQECD STQLKNSLSG SNLECKNPSL EFTLGRPDWN
501: GKGQA

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.