Factsheet for Solyc11g011770.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034663	Potato	nucleus	93.07	95.56
Solyc05g051060.2.1	Tomato	nucleus	37.45	60.92
KRG97985	Soybean	nucleus	54.55	52.94
GSMUA_Achr1P23970_001	Banana	nucleus	23.16	52.2
KRH30907	Soybean	nucleus	54.98	50.3
GSMUA_Achr2P18070_001	Banana	nucleus	28.57	49.07
GSMUA_Achr11P...	Banana	nucleus	24.03	46.84
GSMUA_AchrUn_...	Banana	nucleus	32.25	45.85
KRH74367	Soybean	nucleus	26.62	44.57
CDY35557	Canola	nucleus	31.82	44.01
CDY43006	Canola	nucleus	32.03	43.53
GSMUA_Achr3P00380_001	Banana	nucleus	24.68	43.51
VIT_02s0012g01940.t01	Wine grape	nucleus	34.63	43.48
GSMUA_Achr9P23320_001	Banana	nucleus	21.21	43.36
GSMUA_Achr8P30770_001	Banana	nucleus	33.12	43.1
Os09t0395300-01	Rice	nucleus	35.06	42.97
Solyc06g066340.2.1	Tomato	nucleus	27.06	42.96
CDX93847	Canola	nucleus	30.74	42.01
Solyc08g076400.2.1	Tomato	nucleus	23.81	41.83
CDY01293	Canola	nucleus	30.74	41.04
HORVU5Hr1G060310.22	Barley	nucleus	38.74	40.32
Solyc08g005260.1.1	Tomato	nucleus	31.17	39.89
TraesCS6A01G007300.1	Wheat	nucleus	28.57	39.76
TraesCS5A01G203200.1	Wheat	nucleus	38.96	39.74
TraesCS5D01G209600.1	Wheat	nucleus, plastid	38.53	39.64
HORVU6Hr1G000410.1	Barley	nucleus	28.14	39.51
TraesCS5B01G201900.1	Wheat	nucleus, plastid	38.53	39.47
TraesCS6D01G011600.1	Wheat	nucleus	28.14	39.16
Bra023254.1-P	Field mustard	nucleus	30.95	39.07
KRH39575	Soybean	nucleus	32.9	38.97
GSMUA_AchrUn_...	Banana	nucleus	28.79	38.89
GSMUA_AchrUn_...	Banana	nucleus	26.19	38.66
Bra033844.1-P	Field mustard	nucleus	32.68	38.52
TraesCS6B01G012800.1	Wheat	nucleus	27.49	38.14
AT1G32240.1	Thale cress	nucleus	31.17	37.11
Zm00001d020384_P001	Maize	nucleus	39.61	36.17
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	31.17	34.87
KXG35581	Sorghum	nucleus	38.53	34.03
GSMUA_AchrUn_...	Banana	nucleus	27.27	31.82
Solyc09g005030.1.1	Tomato	nucleus	9.96	31.51
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	24.03	31.27
TraesCS6B01G293700.1	Wheat	nucleus	24.03	31.27
Solyc04g079600.2.1	Tomato	nucleus	20.78	31.17
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	24.03	31.09
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	24.46	30.54
Os02t0696900-00	Rice	plasma membrane	23.81	29.81
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	24.03	29.6
Zm00001d017702_P001	Maize	peroxisome	24.24	29.47
Solyc02g080860.1.1	Tomato	nucleus	12.12	22.13
Solyc06g051060.2.1	Tomato	nucleus	11.47	20.87
Solyc12g006280.1.1	Tomato	nucleus	7.79	20.69
Solyc10g076460.1.1	Tomato	nucleus	12.12	18.54
Solyc02g080730.1.1	Tomato	nucleus	10.17	17.41
Solyc02g080740.1.1	Tomato	nucleus	10.17	16.97
Solyc02g076670.2.1	Tomato	nucleus	12.34	16.86
Solyc04g008480.1.1	Tomato	nucleus	10.61	16.5
Solyc03g006150.2.1	Tomato	extracellular, nucleus	10.82	16.29
Solyc02g080720.1.1	Tomato	nucleus	11.26	15.95
Solyc02g080710.1.1	Tomato	nucleus	11.9	15.32
Solyc07g045000.2.1	Tomato	nucleus	4.33	11.36
Solyc02g080680.1.1	Tomato	mitochondrion	4.98	10.04

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0044212
InterPro:Homeobox-like_sf	UniProt:K4D5Y2	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF3
InterPro:SANT/Myb	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc11g011770.1	EnsemblPlants:Solyc11g011770.1.1	TIGRFAMs:TIGR01557	UniParc:UPI0002769C57
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:4746134..4752006

Molecular Weight (calculated)

51754.0 Da

IEP (calculated)

7.599

GRAVY (calculated)

-0.850

Length

462 amino acids

Sequence
(BLAST)

001: MPLEGVFIET PSSSTKQIPD LSLNISPPTS LDLSGRRCVT EVSENHERLL PEFSKTGNCL TELSLAHPTN ITTTTTTTIA NTNTVINDDT TTRRGFLDHL
101: PRNPYYNNHH YQHQYQHQHQ SQNYSHLVQP MNQINHGVSS LDVSDGLRPI KGIPVYNHNR SFPFLATNID KEKDPKMCFY PSSSPPPSSS PSPSSPSPYF
201: NNMFNGISSS SYHHVPHHHP LQYHHHHHSQ YGHLIHNSHH ENIANSHSLM RSRFLPKLPA KRSMRAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL
301: MDVKDLTLAH VKSHLQMYRT VKTTDKPAVS SGQSDGSGED DLTTIGSTGG GDRAGLGRFM DQRGGSDGSL QPEPDYPSTA TNTLWSNSSS SREGWLQANS
401: NDANVLMRSH SFPSQQRSSH QIEECNSSKP KSYNIGSNLD HQKNPSLEFT LGRPDWIEKD HE

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.