Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042480 | Potato | nucleus | 45.96 | 80.49 |
| Solyc02g080720.1.1 | Tomato | nucleus | 69.08 | 76.07 |
| Solyc02g080740.1.1 | Tomato | nucleus | 54.04 | 70.04 |
| Solyc02g080730.1.1 | Tomato | nucleus | 51.81 | 68.89 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 39.83 | 62.45 |
| CDY71094 | Canola | mitochondrion | 13.09 | 58.75 |
| Bra018498.1-P | Field mustard | mitochondrion | 11.42 | 57.75 |
| Solyc02g080860.1.1 | Tomato | nucleus | 35.38 | 50.2 |
| PGSC0003DMT400042402 | Potato | nucleus | 23.68 | 48.57 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 16.16 | 47.15 |
| AT4G04555.1 | Thale cress | mitochondrion | 10.59 | 35.85 |
| Solyc09g005030.1.1 | Tomato | nucleus | 13.93 | 34.25 |
| CDY00733 | Canola | mitochondrion, nucleus | 13.09 | 33.1 |
| Bra029503.1-P | Field mustard | mitochondrion | 14.76 | 30.81 |
| CDY16660 | Canola | mitochondrion | 14.76 | 30.64 |
| CDX94559 | Canola | mitochondrion | 14.76 | 30.64 |
| Solyc12g006280.1.1 | Tomato | nucleus | 13.65 | 28.16 |
| KRG99004 | Soybean | nucleus | 15.88 | 27.4 |
| CDX97319 | Canola | mitochondrion | 15.32 | 26.57 |
| Solyc06g051060.2.1 | Tomato | nucleus | 17.83 | 25.2 |
| AT4G04605.1 | Thale cress | mitochondrion | 15.04 | 24.55 |
| KRH36473 | Soybean | nucleus | 17.83 | 22.61 |
| AT4G04580.1 | Thale cress | nucleus | 10.31 | 22.29 |
| KRH11454 | Soybean | nucleus | 17.55 | 21.95 |
| Solyc10g076460.1.1 | Tomato | nucleus | 17.83 | 21.19 |
| Solyc03g006150.2.1 | Tomato | extracellular, nucleus | 16.99 | 19.87 |
| Solyc02g076670.2.1 | Tomato | nucleus | 18.66 | 19.82 |
| Solyc06g066340.2.1 | Tomato | nucleus | 14.76 | 18.21 |
| Solyc04g008480.1.1 | Tomato | nucleus | 15.04 | 18.18 |
| Solyc05g051060.2.1 | Tomato | nucleus | 14.21 | 17.96 |
| Solyc08g076400.2.1 | Tomato | nucleus | 12.81 | 17.49 |
| Solyc08g005260.1.1 | Tomato | nucleus | 16.71 | 16.62 |
| Solyc07g045000.2.1 | Tomato | nucleus | 8.08 | 16.48 |
| Solyc04g079600.2.1 | Tomato | nucleus | 13.37 | 15.58 |
| KRH45989 | Soybean | nucleus | 5.57 | 12.42 |
| Solyc11g011770.1.1 | Tomato | nucleus | 15.32 | 11.9 |
| Os12t0591600-01 | Rice | nucleus | 2.79 | 5.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K4B9U2 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFscan:PS51294 |
| PANTHER:PTHR31496 | PANTHER:PTHR31496:SF10 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc02g080710.1 | EnsemblPlants:Solyc02g080710.1.1 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0002769202 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:44870061..44872223
Molecular Weight (calculated)
40619.3 Da
IEP (calculated)
8.966
GRAVY (calculated)
-0.557
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKGLEFSEN SPSLSMELGY RSNDKSSEFS IRAYVKSTMP RLRWTHDLHR RFVYAVDHLG GIDRLEFSED SPSLSMELGN NSSDKTSKFA IRAYVKPRIP
101: RLRWIDDLHR RFVYAVDHLG GVNRATPKMV LQIMDVKGLT VSHIKSHLQM YRSLKHQEMQ ALAANGRKRN RIDCSDSMNI PRGNLVHRYN HINGKAAVID
201: GSDQMNFPQG NLVNGYNHIK GKAAMFDGSD QMNFPQGNLV HCYNHNNGKS VFDGHLNPTV TTNYLDKIAS SSTVFPPPWI PMPEKKMGLE GRCYIFRDFF
301: DGTITIRNGE DDNKIVRAYG ISNLPNESAT SMIEEENSHS TMSLELSLSS DISLDLTLG
101: RLRWIDDLHR RFVYAVDHLG GVNRATPKMV LQIMDVKGLT VSHIKSHLQM YRSLKHQEMQ ALAANGRKRN RIDCSDSMNI PRGNLVHRYN HINGKAAVID
201: GSDQMNFPQG NLVNGYNHIK GKAAMFDGSD QMNFPQGNLV HCYNHNNGKS VFDGHLNPTV TTNYLDKIAS SSTVFPPPWI PMPEKKMGLE GRCYIFRDFF
301: DGTITIRNGE DDNKIVRAYG ISNLPNESAT SMIEEENSHS TMSLELSLSS DISLDLTLG
001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
Arabidopsis Description
Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.