Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71094 | Canola | mitochondrion | 33.64 | 92.5 |
| Bra018498.1-P | Field mustard | mitochondrion | 28.18 | 87.32 |
| CDX97319 | Canola | mitochondrion | 75.45 | 80.19 |
| AT4G04555.1 | Thale cress | mitochondrion | 22.27 | 46.23 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 24.09 | 43.09 |
| AT4G04580.1 | Thale cress | nucleus | 22.73 | 30.12 |
| Solyc02g080860.1.1 | Tomato | nucleus | 29.55 | 25.69 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 28.64 | 24.61 |
| KRG99004 | Soybean | nucleus | 22.73 | 24.04 |
| AT1G14600.1 | Thale cress | nucleus | 25.91 | 22.35 |
| AT2G42660.1 | Thale cress | nucleus | 22.27 | 19.22 |
| Solyc02g080730.1.1 | Tomato | nucleus | 22.27 | 18.15 |
| Solyc02g080740.1.1 | Tomato | nucleus | 21.82 | 17.33 |
| PGSC0003DMT400042480 | Potato | nucleus | 15.45 | 16.59 |
| Solyc02g080720.1.1 | Tomato | nucleus | 24.55 | 16.56 |
| AT2G38300.1 | Thale cress | nucleus | 25.0 | 16.18 |
| PGSC0003DMT400042402 | Potato | nucleus | 12.73 | 16.0 |
| AT5G42630.1 | Thale cress | nucleus | 20.0 | 15.94 |
| Solyc02g080710.1.1 | Tomato | nucleus | 24.55 | 15.04 |
| AT4G17695.1 | Thale cress | nucleus | 20.45 | 13.98 |
| AT2G40260.1 | Thale cress | nucleus | 25.45 | 13.66 |
| AT5G16560.1 | Thale cress | nucleus | 23.64 | 12.9 |
| AT1G32240.1 | Thale cress | nucleus | 21.36 | 12.11 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 10.91 | 10.48 |
| KRH45989 | Soybean | nucleus | 5.45 | 7.45 |
| Os12t0591600-01 | Rice | nucleus | 4.55 | 5.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:28719575 | UniProt:A0A1P8B8R6 | ProteinID:ANM67979.1 | ArrayExpress:AT4G04605 |
| EnsemblPlantsGene:AT4G04605 | EnsemblPlants:AT4G04605.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | RefSeq:NP_001329768.1 | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000152B42A |
| SEG:seg | : | : | : | : | : |
Description
Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
Coordinates
chr4:-:2316471..2318152
Molecular Weight (calculated)
25326.6 Da
IEP (calculated)
5.032
GRAVY (calculated)
-0.771
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.