Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042402 | Potato | nucleus | 47.8 | 56.0 |
| Solyc02g080720.1.1 | Tomato | nucleus | 77.07 | 48.47 |
| Solyc02g080710.1.1 | Tomato | nucleus | 80.49 | 45.96 |
| Solyc02g080860.1.1 | Tomato | nucleus | 54.63 | 44.27 |
| Solyc02g080740.1.1 | Tomato | nucleus | 48.29 | 35.74 |
| Solyc02g080730.1.1 | Tomato | nucleus | 42.93 | 32.59 |
| Bra018498.1-P | Field mustard | mitochondrion | 11.22 | 32.39 |
| CDY71094 | Canola | mitochondrion | 11.71 | 30.0 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 15.61 | 26.02 |
| Solyc02g080680.1.1 | Tomato | mitochondrion | 26.34 | 23.58 |
| PGSC0003DMT400074183 | Potato | mitochondrion | 14.15 | 18.35 |
| CDX94559 | Canola | mitochondrion | 14.63 | 17.34 |
| AT4G04555.1 | Thale cress | mitochondrion | 8.78 | 16.98 |
| CDX97319 | Canola | mitochondrion | 16.59 | 16.43 |
| Bra029503.1-P | Field mustard | mitochondrion | 13.66 | 16.28 |
| CDY00733 | Canola | mitochondrion, nucleus | 11.22 | 16.2 |
| CDY16660 | Canola | mitochondrion | 13.66 | 16.18 |
| AT4G04605.1 | Thale cress | mitochondrion | 16.59 | 15.45 |
| KRH36473 | Soybean | nucleus | 20.98 | 15.19 |
| KRG99004 | Soybean | nucleus | 15.12 | 14.9 |
| KRH11454 | Soybean | nucleus | 20.49 | 14.63 |
| PGSC0003DMT400041071 | Potato | nucleus | 21.46 | 14.57 |
| PGSC0003DMT400002410 | Potato | nucleus | 13.17 | 12.5 |
| PGSC0003DMT400026419 | Potato | nucleus | 20.49 | 12.07 |
| PGSC0003DMT400068508 | Potato | nucleus | 18.54 | 11.62 |
| PGSC0003DMT400077217 | Potato | nucleus | 20.49 | 11.02 |
| PGSC0003DMT400011207 | Potato | nucleus | 12.68 | 10.97 |
| AT4G04580.1 | Thale cress | nucleus | 8.78 | 10.84 |
| PGSC0003DMT400075668 | Potato | nucleus | 16.1 | 10.71 |
| PGSC0003DMT400047532 | Potato | nucleus | 18.54 | 10.53 |
| PGSC0003DMT400038366 | Potato | nucleus | 13.17 | 10.47 |
| PGSC0003DMT400043200 | Potato | nucleus | 16.59 | 8.54 |
| PGSC0003DMT400030518 | Potato | nucleus | 12.68 | 8.44 |
| PGSC0003DMT400017981 | Potato | nucleus | 14.63 | 7.96 |
| KRH45989 | Soybean | nucleus | 5.85 | 7.45 |
| PGSC0003DMT400034663 | Potato | nucleus | 15.61 | 7.11 |
| Os12t0591600-01 | Rice | nucleus | 3.41 | 3.5 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400042480 | EnsemblPlantsGene:PGSC0003DMG400016474 | Gene3D:1.10.10.60 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | PGSC:PGSC0003DMG400016474 |
| SEG:seg | UniParc:UPI000295116E | UniProt:M1BD39 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400016474]
Coordinates
chr2:+:36475436..36477154
Molecular Weight (calculated)
23060.1 Da
IEP (calculated)
6.893
GRAVY (calculated)
-0.615
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKGLKFSEN SPSLSIELGN SNSDQSSIRP YVRSRMPRLR WTHDLHRSFV HAVERLGGVD PEAASGRKRN RIDGSDQMNF PQGNFLHSYY HFNGKAVFDG
101: HLNSNVTTNY LDKIASAPTV FPPPWKPMPE KMMGLEGRCY MFRDFFNGSI TIRDGDDENK IVRAYGTSNL SNKSATSMIE EEDSHSTMSL ELSLSSDISL
201: DLTLG
101: HLNSNVTTNY LDKIASAPTV FPPPWKPMPE KMMGLEGRCY MFRDFFNGSI TIRDGDDENK IVRAYGTSNL SNKSATSMIE EEDSHSTMSL ELSLSSDISL
201: DLTLG
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.