Factsheet for Bra018498.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71094	Canola	mitochondrion	90.14	80.0
VIT_00s1624g00010.t01	Wine grape	nucleus	64.79	37.4
CDX97319	Canola	mitochondrion	90.14	30.92
AT4G04605.1	Thale cress	mitochondrion	87.32	28.18
Bra029503.1-P	Field mustard	mitochondrion	57.75	23.84
Bra026202.1-P	Field mustard	nucleus	60.56	21.5
Solyc02g080860.1.1	Tomato	nucleus	69.01	19.37
Bra021038.1-P	Field mustard	plastid	47.89	18.99
KRG99004	Soybean	nucleus	52.11	17.79
Bra026618.1-P	Field mustard	nucleus	63.38	17.18
Bra026818.1-P	Field mustard	nucleus	56.34	16.67
Bra024836.1-P	Field mustard	nucleus	60.56	16.6
Solyc02g080740.1.1	Tomato	nucleus	59.15	15.16
Solyc02g080730.1.1	Tomato	nucleus	56.34	14.81
Bra008613.1-P	Field mustard	nucleus	53.52	13.06
Bra005124.1-P	Field mustard	nucleus	61.97	13.06
Solyc02g080720.1.1	Tomato	nucleus	57.75	12.58
Solyc02g080710.1.1	Tomato	nucleus	57.75	11.42
Bra000180.1-P	Field mustard	nucleus	61.97	11.31
PGSC0003DMT400042480	Potato	nucleus	32.39	11.22
Bra040176.1-P	Field mustard	nucleus	47.89	10.73
Bra023254.1-P	Field mustard	nucleus	53.52	10.38
Bra004973.1-P	Field mustard	nucleus	59.15	10.32
PGSC0003DMT400042402	Potato	nucleus	25.35	10.29
Bra033844.1-P	Field mustard	nucleus	53.52	9.69
Bra023570.1-P	Field mustard	cytosol	53.52	9.55
Bra000270.1-P	Field mustard	nucleus	32.39	7.99
Bra017425.1-P	Field mustard	nucleus	21.13	7.58
Solyc02g080680.1.1	Tomato	mitochondrion	22.54	6.99
Bra035311.1-P	Field mustard	nucleus	50.7	5.77
Bra006360.1-P	Field mustard	nucleus	23.94	2.32
Bra017021.1-P	Field mustard	nucleus	2.82	0.55
Os12t0591600-01	Rice	nucleus	1.41	0.5
KRH45989	Soybean	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra018498	EnsemblPlants:Bra018498.1	EnsemblPlants:Bra018498.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:M4DPQ7	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31314	PANTHER:PTHR31314:SF41	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000254810E

Description

AT2G02060 (E=6e-022) | transcription factor

Coordinates

chrA05:-:8695407..8695914

Molecular Weight (calculated)

8241.2 Da

IEP (calculated)

11.289

GRAVY (calculated)

-0.139

Length

71 amino acids

Sequence
(BLAST)

1: MKTPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGEHRA TPKMVLQLMD VRGLTISHVK SHLQVLKFVY I

Best Arabidopsis Sequence Match ( AT4G04605.1 )
(BLAST)

001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA

Arabidopsis Description

Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.