Factsheet for Bra026202.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45272	Canola	nucleus	100.0	80.97
CDY41090	Canola	nucleus	96.0	77.73
AT1G14600.1	Thale cress	nucleus	84.5	66.27
Bra026818.1-P	Field mustard	nucleus	78.5	65.42
Bra018498.1-P	Field mustard	mitochondrion	21.5	60.56
Bra026618.1-P	Field mustard	nucleus	62.5	47.71
Bra024836.1-P	Field mustard	nucleus	61.5	47.49
Bra017425.1-P	Field mustard	nucleus	39.0	39.39
KRH49492	Soybean	nucleus	43.0	28.67
KRG89170	Soybean	nucleus	42.0	28.57
KRG90693	Soybean	nucleus	39.5	26.07
VIT_01s0137g00050.t01	Wine grape	nucleus	39.0	25.74
Bra029503.1-P	Field mustard	mitochondrion	22.0	25.58
GSMUA_Achr11P...	Banana	nucleus	29.0	24.79
GSMUA_Achr2P11010_001	Banana	nucleus	36.0	24.66
PGSC0003DMT400075668	Potato	nucleus	37.0	24.03
Solyc04g008480.1.1	Tomato	nucleus	35.5	23.91
KRH36060	Soybean	nucleus	28.0	22.95
Bra021038.1-P	Field mustard	plastid	20.5	22.91
GSMUA_Achr4P25920_001	Banana	nucleus	28.0	22.58
GSMUA_AchrUn_...	Banana	nucleus	33.0	22.37
GSMUA_Achr5P19200_001	Banana	nucleus	29.5	20.63
Bra005124.1-P	Field mustard	nucleus	34.0	20.18
Bra000180.1-P	Field mustard	nucleus	33.0	16.97
Bra004973.1-P	Field mustard	nucleus	32.0	15.72
Bra040176.1-P	Field mustard	nucleus	24.0	15.14
Bra008613.1-P	Field mustard	nucleus	22.0	15.12
Bra023254.1-P	Field mustard	nucleus	25.0	13.66
Bra000270.1-P	Field mustard	nucleus	18.5	12.85
Bra033844.1-P	Field mustard	nucleus	25.0	12.76
Bra023570.1-P	Field mustard	cytosol	24.0	12.06
Bra017021.1-P	Field mustard	nucleus	12.5	6.87
Bra035311.1-P	Field mustard	nucleus	21.0	6.73
Bra006360.1-P	Field mustard	nucleus	17.0	4.64

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra026202	EnsemblPlants:Bra026202.1	EnsemblPlants:Bra026202.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EBP3	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF41	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000253EF3E	SEG:seg	:	:

Description

AT1G14600 (E=3e-041) | DNA binding / transcription factor

Coordinates

chrA06:-:5599526..5602008

Molecular Weight (calculated)

22358.5 Da

IEP (calculated)

9.571

GRAVY (calculated)

-0.560

Length

200 amino acids

Sequence
(BLAST)

001: MGKCGRSSDG GISGVRPYVR SPVPRLRWTP ELHRSFVHAV DLLGGQYKAT PKLVLKIMDV KGLTISHVKS HLQMYRGSRP TLLGRLGTDN DDDDFLNIMN
101: MARTKTFAGN GESIKFQPHQ FFEAQSMKSN MGNEHEEEEL SLSLSLNHPP NHQQRWRSNT SSSLSEASEA VSSPFTSRDC FASSKIDLNL NLSFSSLFRS

Best Arabidopsis Sequence Match ( AT1G14600.1 )
(BLAST)

001: MGRCGRSNDG VIGGVRPYVR SPVPRLRWTP ELHRSFVHAV DLLGGQYKAT PKLVLKIMDV KGLTISHVKS HLQMYRGSRI TLLGKPEESS SPSSRRRRRQ
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS

Arabidopsis Description

Putative Myb family transcription factor At1g14600 [Source:UniProtKB/Swiss-Prot;Acc:Q700D9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.