Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 57.76 | 57.76 |
| PGSC0003DMT400075668 | Potato | nucleus | 45.54 | 44.81 |
| Solyc04g008480.1.1 | Tomato | nucleus | 42.57 | 43.43 |
| Bra026202.1-P | Field mustard | nucleus | 26.07 | 39.5 |
| KRH36060 | Soybean | nucleus | 30.36 | 37.7 |
| KRG89170 | Soybean | nucleus | 35.97 | 37.07 |
| KRH49492 | Soybean | nucleus | 35.64 | 36.0 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 27.72 | 33.87 |
| AT1G14600.1 | Thale cress | nucleus | 28.05 | 33.33 |
| CDY45272 | Canola | nucleus | 27.06 | 33.2 |
| CDY41090 | Canola | nucleus | 26.73 | 32.79 |
| CDY70922 | Canola | nucleus | 27.72 | 32.43 |
| CDX82805 | Canola | nucleus | 25.74 | 32.23 |
| CDX81654 | Canola | nucleus | 25.74 | 32.23 |
| KRH14524 | Soybean | nucleus | 19.8 | 32.09 |
| Bra026818.1-P | Field mustard | nucleus | 25.41 | 32.08 |
| CDY09392 | Canola | nucleus | 27.72 | 32.06 |
| Bra026618.1-P | Field mustard | nucleus | 27.72 | 32.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.02 | 31.86 |
| CDY59419 | Canola | nucleus | 25.08 | 31.67 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 26.73 | 31.64 |
| Bra024836.1-P | Field mustard | nucleus | 26.73 | 31.27 |
| CDY17617 | Canola | nucleus | 26.73 | 31.15 |
| KRH73595 | Soybean | nucleus | 21.12 | 30.05 |
| CDY17443 | Canola | nucleus | 26.07 | 29.92 |
| GSMUA_Achr11P... | Banana | nucleus | 23.1 | 29.91 |
| CDY04115 | Canola | nucleus | 25.41 | 28.41 |
| KRH36473 | Soybean | nucleus | 26.4 | 28.27 |
| KRG99004 | Soybean | nucleus | 19.14 | 27.88 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 26.4 | 27.4 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 25.74 | 27.27 |
| KRH11454 | Soybean | nucleus | 25.41 | 26.83 |
| KRH15279 | Soybean | mitochondrion | 15.84 | 24.87 |
| Bra017425.1-P | Field mustard | nucleus | 14.52 | 22.22 |
| KRH11029 | Soybean | nucleus | 25.74 | 21.37 |
| CDY04116 | Canola | nucleus | 13.86 | 20.69 |
| KRH21258 | Soybean | nucleus | 25.41 | 20.64 |
| KRH75999 | Soybean | nucleus | 22.44 | 19.83 |
| KRH65638 | Soybean | nucleus | 21.78 | 19.08 |
| KRH27060 | Soybean | nucleus | 23.1 | 19.02 |
| KRH22274 | Soybean | nucleus | 22.77 | 18.7 |
| KRH00305 | Soybean | nucleus | 22.44 | 18.43 |
| KRH49433 | Soybean | nucleus | 21.78 | 18.03 |
| KRH58975 | Soybean | nucleus | 23.43 | 17.71 |
| KRH42874 | Soybean | nucleus | 23.43 | 17.66 |
| KRH74367 | Soybean | nucleus | 15.51 | 17.03 |
| KRH51927 | Soybean | nucleus | 17.82 | 16.36 |
| KRH61226 | Soybean | nucleus | 17.82 | 16.31 |
| KRH05752 | Soybean | nucleus | 17.49 | 16.01 |
| KRH39575 | Soybean | nucleus | 19.8 | 15.38 |
| KRH39002 | Soybean | nucleus | 17.49 | 12.86 |
| KRH48713 | Soybean | nucleus | 17.16 | 12.5 |
| KRH17301 | Soybean | nucleus | 16.83 | 10.99 |
| KRH72942 | Soybean | nucleus | 16.83 | 10.94 |
| KRG97985 | Soybean | nucleus | 17.16 | 10.92 |
| KRH45989 | Soybean | nucleus | 5.61 | 10.56 |
| KRH30907 | Soybean | nucleus | 17.16 | 10.3 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100796733 | MapMan:15.5.2.3 | EMBL:ACUP02012633 | EnsemblPlantsGene:GLYMA_20G108600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | UniProt:I1NFA5 | InterPro:IPR017930 | EnsemblPlants:KRG90693 |
| ProteinID:KRG90693 | ProteinID:KRG90693.1 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00023DC4B6 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:35098678..35103151
Molecular Weight (calculated)
33827.4 Da
IEP (calculated)
6.825
GRAVY (calculated)
-0.719
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCGREGSV RQYVRSKVPR LRWTPELHRC FVHAIDSLGG HHKATPKLVL QLMDVKGLTI SHVKSHLQMY RSMRGDLGRQ GRTSSQHRNQ SFEEHDDGCV
101: DEGNDVGVEY SCSKPMGRES DSFFGHSNLP PKRARIETRS SISESLQCSQ RLCDAVQNPY CFYDYLQQKK PMADEHKEFS TWQQAQPHSL LFPEFPNHTS
201: FNSPNQQSDF LQVTKLNEGK STSQPSNVLV NTTTETAIAE VEDELSLSLT LPNPSPQSSG SEISEAISSC PGFGNNYKDC SSSSTHTLKE RINLDLSLAL
301: CGN
101: DEGNDVGVEY SCSKPMGRES DSFFGHSNLP PKRARIETRS SISESLQCSQ RLCDAVQNPY CFYDYLQQKK PMADEHKEFS TWQQAQPHSL LFPEFPNHTS
201: FNSPNQQSDF LQVTKLNEGK STSQPSNVLV NTTTETAIAE VEDELSLSLT LPNPSPQSSG SEISEAISSC PGFGNNYKDC SSSSTHTLKE RINLDLSLAL
301: CGN
001: MGRCGRSNDG VIGGVRPYVR SPVPRLRWTP ELHRSFVHAV DLLGGQYKAT PKLVLKIMDV KGLTISHVKS HLQMYRGSRI TLLGKPEESS SPSSRRRRRQ
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS
Arabidopsis Description
Putative Myb family transcription factor At1g14600 [Source:UniProtKB/Swiss-Prot;Acc:Q700D9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.