CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30907	Soybean	nucleus	92.86	87.52
KRH17301	Soybean	nucleus	63.24	64.87
KRH72942	Soybean	nucleus	62.82	64.16
PGSC0003DMT400034663	Potato	nucleus	53.78	56.89
Solyc11g011770.1.1	Tomato	nucleus	52.94	54.55
GSMUA_Achr1P23970_001	Banana	nucleus	21.64	50.24
GSMUA_Achr2P18070_001	Banana	nucleus	28.36	50.19
GSMUA_Achr11P...	Banana	nucleus	24.58	49.37
GSMUA_AchrUn_...	Banana	nucleus	32.56	47.69
GSMUA_Achr8P30770_001	Banana	nucleus	34.66	46.48
GSMUA_Achr9P23320_001	Banana	nucleus	21.85	46.02
KRH74367	Soybean	nucleus	26.26	45.29
Os09t0395300-01	Rice	nucleus	34.87	44.03
HORVU5Hr1G060310.22	Barley	nucleus	40.97	43.92
TraesCS5D01G209600.1	Wheat	nucleus, plastid	40.76	43.21
TraesCS5B01G201900.1	Wheat	nucleus, plastid	40.76	43.02
TraesCS5A01G203200.1	Wheat	nucleus	40.76	42.83
GSMUA_Achr3P00380_001	Banana	nucleus	23.11	41.98
KRH15279	Soybean	mitochondrion	16.6	40.93
KRH39575	Soybean	nucleus	32.56	39.74
Zm00001d020384_P001	Maize	nucleus	41.81	39.33
HORVU6Hr1G000410.1	Barley	nucleus	27.1	39.21
GSMUA_AchrUn_...	Banana	nucleus	25.42	38.66
TraesCS6A01G007300.1	Wheat	nucleus	26.89	38.55
TraesCS6D01G011600.1	Wheat	nucleus	26.68	38.25
TraesCS6B01G012800.1	Wheat	nucleus	26.26	37.54
KXG35581	Sorghum	nucleus	41.18	37.48
GSMUA_AchrUn_...	Banana	nucleus	26.89	37.43
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	30.46	35.11
KRH39002	Soybean	nucleus	30.25	34.95
KRH05752	Soybean	nucleus	23.95	34.44
KRH48713	Soybean	nucleus	29.62	33.89
GSMUA_AchrUn_...	Banana	nucleus	27.1	32.58
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	24.16	32.39
TraesCS6B01G293700.1	Wheat	nucleus	24.16	32.39
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	24.16	32.21
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	23.74	30.54
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	23.74	30.13
KRH51927	Soybean	nucleus	20.8	30.0
Os02t0696900-00	Rice	plasma membrane	23.11	29.81
KRH61226	Soybean	nucleus	20.59	29.61
Zm00001d017702_P001	Maize	peroxisome	22.9	28.68
KRH14524	Soybean	nucleus	9.45	24.06
KRG99004	Soybean	nucleus	9.45	21.63
KRH73595	Soybean	nucleus	9.24	20.66
KRH36473	Soybean	nucleus	11.55	19.43
KRH11454	Soybean	nucleus	11.55	19.16
KRH11029	Soybean	nucleus	13.66	17.81
KRH21258	Soybean	nucleus	13.87	17.69
KRG89170	Soybean	nucleus	10.71	17.35
KRH49492	Soybean	nucleus	10.92	17.33
KRG90693	Soybean	nucleus	10.92	17.16
KRH22274	Soybean	nucleus	12.39	15.99
KRH27060	Soybean	nucleus	12.18	15.76
KRH58975	Soybean	nucleus	13.24	15.71
KRH42874	Soybean	nucleus	13.24	15.67
KRH75999	Soybean	nucleus	11.13	15.45
KRH65638	Soybean	nucleus	10.71	14.74
KRH00305	Soybean	nucleus	10.92	14.09
KRH49433	Soybean	nucleus	10.71	13.93
KRH36060	Soybean	nucleus	5.25	10.25
KRH45989	Soybean	nucleus	2.73	8.07

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100815360	MapMan:15.5.2.3	EMBL:ACUP02010833	EnsemblPlantsGene:GLYMA_18G043000	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:K7MPV5	EnsemblPlants:KRG97985	ProteinID:KRG97985
ProteinID:KRG97985.1	ProteinID:KRG97986.1	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF3
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000295A67D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:3626320..3632838

Molecular Weight (calculated)

51672.6 Da

IEP (calculated)

8.225

GRAVY (calculated)

-0.717

Length

476 amino acids

Sequence
(BLAST)

001: MPLEGIFIEP TSTSTPDLSL HISPPSTSFS SSSICNNNNT SGGGGGINYE ARNSTSTNFP SQAHIELSLG RNFSVGGGRG GGVPEEPLPH HNNNINNNPY
101: YQTQQAHFHH LQHHSNASRA TTTTSTTTSS SNHMSHINYG VSLLDVSSEG LRPIKGIPVY HNRSFPFLPS EHSRDNKDHH AKMCLYHHMP TYPSLSSSCS
201: PLCSSSSSSS SPAAPYFAAA AAAYRAATAT RFNGISGEAF KSHHPLHHHH SSSPHYGVGL GPSHETSAGL MRSRFLPKLP AKRSMRAPRM RWTSTLHARF
301: VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKTTDKPAA SSGLSDGSGE DDMSPMGSSG GMRQFSDQRS LSDRPLQQDM DYSSGNNTLW
401: SNSSSSRETW QQNNSNDVDG FRPPIFQSQQ ISGGHQIQEC DSTQLKNSLS GSNLECKNPS LEFTLGRPDW NGKGQA

Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)

001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH

Arabidopsis Description

KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.