Factsheet for GSMUA_Achr8P30770_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P06700_001	Banana	cytosol, nucleus, plastid	30.99	65.09
GSMUA_Achr1P22100_001	Banana	nucleus	33.52	54.34
GSMUA_AchrUn_...	Banana	nucleus	44.79	48.92
GSMUA_Achr1P23970_001	Banana	nucleus	25.63	44.39
GSMUA_Achr5P00310_001	Banana	nucleus	10.99	43.33
GSMUA_Achr11P...	Banana	nucleus	26.76	40.08
GSMUA_Achr8P22900_001	Banana	nucleus	42.54	40.05
GSMUA_Achr9P23320_001	Banana	nucleus	25.35	39.82
GSMUA_Achr7P00680_001	Banana	cytosol, golgi, nucleus	24.79	39.29
GSMUA_Achr2P18070_001	Banana	nucleus	29.58	39.03
GSMUA_Achr7P02420_001	Banana	nucleus	38.87	38.98
GSMUA_Achr10P...	Banana	nucleus	30.42	38.85
GSMUA_Achr9P30700_001	Banana	mitochondrion	11.83	38.53
KRH74367	Soybean	nucleus	29.3	37.68
GSMUA_Achr3P00380_001	Banana	nucleus	27.61	37.4
CDX84102	Canola	nucleus	27.89	36.53
KRG97985	Soybean	nucleus	46.48	34.66
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	26.48	34.56
PGSC0003DMT400034663	Potato	nucleus	43.38	34.22
GSMUA_Achr2P13320_001	Banana	nucleus, plastid	26.48	34.06
GSMUA_Achr10P...	Banana	nucleus	20.0	33.97
GSMUA_AchrUn_...	Banana	nucleus	29.86	33.87
VIT_16s0039g01900.t01	Wine grape	nucleus	30.7	33.75
Solyc11g011770.1.1	Tomato	nucleus	43.1	33.12
KRH30907	Soybean	nucleus	45.92	32.28
GSMUA_AchrUn_...	Banana	nucleus	30.99	32.16
GSMUA_Achr4P32400_001	Banana	plastid	22.25	31.47
KRH39575	Soybean	nucleus	34.37	31.28
Bra023254.1-P	Field mustard	nucleus	32.11	31.15
AT1G32240.1	Thale cress	nucleus	33.52	30.67
Bra033844.1-P	Field mustard	nucleus	33.24	30.1
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	34.37	29.54
GSMUA_Achr4P04510_001	Banana	nucleus	30.99	29.33
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	27.04	27.04
GSMUA_AchrUn_...	Banana	nucleus	30.14	27.02
TraesCS6B01G293700.1	Wheat	nucleus	26.76	26.76
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	26.76	26.61
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	27.32	26.22
Zm00001d017702_P001	Maize	peroxisome	27.61	25.79
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	27.04	25.6
Os02t0696900-00	Rice	plasma membrane	25.63	24.66
GSMUA_Achr11P...	Banana	nucleus	13.52	20.51
GSMUA_Achr7P03510_001	Banana	nucleus	11.55	19.9
GSMUA_Achr5P19200_001	Banana	nucleus	14.37	17.83
GSMUA_Achr7P22410_001	Banana	nucleus	16.06	17.17
GSMUA_Achr2P11010_001	Banana	nucleus	14.08	17.12
GSMUA_AchrUn_...	Banana	nucleus	14.08	16.95
GSMUA_Achr4P25920_001	Banana	nucleus	11.83	16.94
GSMUA_Achr7P09370_001	Banana	nucleus	15.21	14.29
GSMUA_Achr10P...	Banana	nucleus	18.87	12.93
GSMUA_Achr7P13880_001	Banana	nucleus	14.65	12.68

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G30770_001
EnsemblPlants:GSMUA_Achr8P30770_001	EnsemblPlants:GSMUA_Achr8T30770_001	InterPro:Homeobox-like_sf	UniProt:M0TV29	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002966C08	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G30770_001]

Coordinates

chr8:+:32700810..32703773

Molecular Weight (calculated)

38719.7 Da

IEP (calculated)

6.569

GRAVY (calculated)

-0.595

Length

355 amino acids

Sequence
(BLAST)

001: MSSQGVFTEA SSTASPDLSL QIGPPSIAPS AISDAGSGSR ACVDLSLSST MSSSEGNIFQ GFRGPPPFHE SIIPLTGTPT YVDGRSPFNQ MSSSSLSSSS
101: SSTGCWSAIY STASYLHPHN GSHSSVSSYT WTPPLPTWIM GSSSDSFSCY HRLPCGVGSW EASQNLMRSR FLPRYPTKRS TRAPRMRWTS SLHTRFVRAV
201: ELLGGHERAT PKSILELMDV KDLTLAHVKS HLQMYRTIKS TDKPAASSGQ SDDSGEEDSA PRDRDQPLLM EHKVSDPPKQ DHCLETSSGI SREDWLPINS
301: NYLDSTGLRS APLSSQIEHD SSGSNGTNDS YEEHRIPSLE FSLGRSDWYD KRPLC

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.