Factsheet for PGSC0003DMT400034663

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g011770.1.1	Tomato	nucleus	95.56	93.07
PGSC0003DMT400017981	Potato	nucleus	50.44	60.21
KRG97985	Soybean	nucleus	56.89	53.78
GSMUA_Achr1P23970_001	Banana	nucleus	23.78	52.2
KRH30907	Soybean	nucleus	57.56	51.29
GSMUA_Achr2P18070_001	Banana	nucleus	29.33	49.07
GSMUA_Achr11P...	Banana	nucleus	24.67	46.84
GSMUA_AchrUn_...	Banana	nucleus	33.78	46.77
KRH74367	Soybean	nucleus	27.78	45.29
PGSC0003DMT400038366	Potato	nucleus	25.56	44.57
CDY35557	Canola	nucleus	32.22	43.41
GSMUA_Achr8P30770_001	Banana	nucleus	34.22	43.38
GSMUA_Achr9P23320_001	Banana	nucleus	21.78	43.36
VIT_02s0012g01940.t01	Wine grape	nucleus	35.33	43.21
GSMUA_Achr3P00380_001	Banana	nucleus	25.11	43.13
CDY43006	Canola	nucleus	32.44	42.94
Os09t0395300-01	Rice	nucleus	35.78	42.71
CDX93847	Canola	nucleus	31.33	41.72
CDY01293	Canola	nucleus	31.33	40.75
PGSC0003DMT400047532	Potato	nucleus	32.22	40.17
HORVU5Hr1G060310.22	Barley	nucleus	39.56	40.09
TraesCS6A01G007300.1	Wheat	nucleus	29.33	39.76
TraesCS5A01G203200.1	Wheat	nucleus	39.78	39.51
HORVU6Hr1G000410.1	Barley	nucleus	28.89	39.51
KRH39575	Soybean	nucleus	34.22	39.49
TraesCS5D01G209600.1	Wheat	nucleus, plastid	39.33	39.42
TraesCS5B01G201900.1	Wheat	nucleus, plastid	39.33	39.25
TraesCS6D01G011600.1	Wheat	nucleus	28.89	39.16
GSMUA_AchrUn_...	Banana	nucleus	29.56	38.89
Bra023254.1-P	Field mustard	nucleus	31.56	38.8
GSMUA_AchrUn_...	Banana	nucleus	26.89	38.66
TraesCS6B01G012800.1	Wheat	nucleus	28.22	38.14
Bra033844.1-P	Field mustard	nucleus	33.11	38.01
PGSC0003DMT400043200	Potato	nucleus	33.33	37.69
AT1G32240.1	Thale cress	nucleus	32.0	37.11
Zm00001d020384_P001	Maize	nucleus	40.0	35.57
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	32.0	34.87
KXG35581	Sorghum	nucleus	38.89	33.46
PGSC0003DMT400030518	Potato	nucleus	21.78	31.82
GSMUA_AchrUn_...	Banana	nucleus	27.78	31.57
TraesCS6B01G293700.1	Wheat	nucleus	24.44	30.99
TraesCS6A01G266400.1	Wheat	cytosol, nucleus, peroxisome, plastid	24.44	30.99
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	24.44	30.81
KXG30956	Sorghum	cytosol, nucleus, peroxisome, plastid	24.89	30.27
Os02t0696900-00	Rice	plasma membrane	24.22	29.54
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	24.44	29.33
Zm00001d017702_P001	Maize	peroxisome	24.67	29.21
PGSC0003DMT400074183	Potato	mitochondrion	7.56	21.52
PGSC0003DMT400011207	Potato	nucleus	10.44	19.83
PGSC0003DMT400041071	Potato	nucleus	12.67	18.87
PGSC0003DMT400002410	Potato	nucleus	8.67	18.06
PGSC0003DMT400026419	Potato	nucleus	12.89	16.67
PGSC0003DMT400075668	Potato	nucleus	11.11	16.23
PGSC0003DMT400042480	Potato	nucleus	7.11	15.61
PGSC0003DMT400068508	Potato	nucleus	11.33	15.6
PGSC0003DMT400042402	Potato	nucleus	6.0	15.43
PGSC0003DMT400077217	Potato	nucleus	12.44	14.7

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102582650	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	UniProt:M1B136	InterPro:Myb_dom_plants	PFAM:PF00249	EnsemblPlantsGene:PGSC0003DMG400013324	PGSC:PGSC0003DMG400013324
EnsemblPlants:PGSC0003DMT400034663	PANTHER:PTHR31496	PANTHER:PTHR31496:SF3	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI0002967905	RefSeq:XP_006352401.1	SEG:seg	:	:	:

Description

KANADI like transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400013324]

Coordinates

chr11:+:967148..974726

Molecular Weight (calculated)

50333.4 Da

IEP (calculated)

7.589

GRAVY (calculated)

-0.823

Length

450 amino acids

Sequence
(BLAST)

001: MPLEGVFIET PSSSTKQIPD LSLNISPPTN LDLSSRRCVT EVSENHERLL SEFSKTGNCL TELSLAHPTN ITTTTTTVIN DDMTTRRGFL DHLPRNPYYI
101: NHHHQHHHQS QNYSHMVQPM NQINHGVSSL DVSDGLRPIK GIPVYNHNRS FPFLATNIDK EKDPKMCFYP SSSPSSSSPS SPSPYFNNRF NGISSSSYHH
201: VPHHHPLQYH HHLSQYGHLG GLGHNSHHEN IANSHSLMRS RFLPKLPAKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK
301: SHLQMYRTVK TTDKPAVSSG QSDGSGEDDL TTIGSTGGGD RAGLGQFMDQ RGGSDGSLQP EPDYPSTATN TLWSNSSSSR EGWLQANSND TNVLMRSHSF
401: PSQQRSGHQI EECNSSRQKS YNIGSNLDHQ KNPSLEFTLG RPDWIEKDHE

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.