Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P23970_001 | Banana | nucleus | 38.98 | 59.51 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 33.23 | 46.02 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 38.02 | 45.42 |
| GSMUA_Achr11P... | Banana | nucleus | 34.19 | 45.15 |
| GSMUA_Achr10P... | Banana | nucleus | 39.94 | 44.96 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 38.34 | 44.61 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 23.96 | 44.38 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 27.48 | 39.27 |
| KRH74367 | Soybean | nucleus | 34.5 | 39.13 |
| CDX84102 | Canola | nucleus | 32.91 | 38.01 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 10.86 | 37.78 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 26.52 | 37.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.66 | 35.38 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 28.75 | 33.09 |
| GSMUA_Achr10P... | Banana | nucleus | 22.04 | 33.01 |
| Bra023254.1-P | Field mustard | nucleus | 38.34 | 32.79 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 43.13 | 32.69 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 26.2 | 32.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.55 | 32.31 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 11.18 | 32.11 |
| KRH39575 | Soybean | nucleus | 39.94 | 32.05 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 28.11 | 31.88 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 35.46 | 31.36 |
| AT1G32240.1 | Thale cress | nucleus | 38.34 | 30.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.98 | 30.81 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 36.74 | 30.67 |
| Bra033844.1-P | Field mustard | nucleus | 38.02 | 30.36 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 33.87 | 29.86 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 33.23 | 27.59 |
| PGSC0003DMT400034663 | Potato | nucleus | 38.66 | 26.89 |
| Solyc11g011770.1.1 | Tomato | nucleus | 38.66 | 26.19 |
| KRG97985 | Soybean | nucleus | 38.66 | 25.42 |
| KRH30907 | Soybean | nucleus | 38.98 | 24.16 |
| GSMUA_Achr11P... | Banana | nucleus | 15.02 | 20.09 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 16.93 | 18.53 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 11.82 | 17.96 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 13.1 | 16.53 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 14.7 | 15.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.7 | 15.59 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 15.65 | 14.76 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 18.21 | 13.9 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 15.97 | 13.23 |
| GSMUA_Achr10P... | Banana | nucleus | 19.17 | 11.58 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG02870_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP02870_001 | EnsemblPlants:GSMUA_AchrUn_randomT02870_001 | InterPro:Homeobox-like_sf | UniProt:M0U5U9 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000296999C | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02870_001]
Coordinates
chrchrUn_random:-:14318356..14321233
Molecular Weight (calculated)
35104.0 Da
IEP (calculated)
9.575
GRAVY (calculated)
-0.515
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MELFAAQPDL SLQISPPSAT PSGRRKHDEN MELGSMEPIP GIPVYRHAPS LALVAPQRQH HHLCGCSSST HSFTTFAASQ GLSRSRFPAK RITRAPRMRW
101: TTTLHDRFVR AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KNTDKPAVPS GQCDGFENGS SGDHSEETLT GIQSLHRSES SGAAHCRVDH
201: AGVWSNTSRI CSQKALKCSP YRTHQARISR ILRSPLADHI DMSFPLQDHF IRLQKETVPA PHRGHARNCQ EQKVKERAQA TENKVRLCIH LSVSVPKIVF
301: LDDMHMYMDL VFH
101: TTTLHDRFVR AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KNTDKPAVPS GQCDGFENGS SGDHSEETLT GIQSLHRSES SGAAHCRVDH
201: AGVWSNTSRI CSQKALKCSP YRTHQARISR ILRSPLADHI DMSFPLQDHF IRLQKETVPA PHRGHARNCQ EQKVKERAQA TENKVRLCIH LSVSVPKIVF
301: LDDMHMYMDL VFH
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.