Factsheet for GSMUA_Achr4P23160_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P32400_001	Banana	plastid	59.93	64.94
GSMUA_Achr7P00680_001	Banana	cytosol, golgi, nucleus	39.34	47.77
GSMUA_Achr2P06700_001	Banana	cytosol, nucleus, plastid	28.68	46.15
GSMUA_Achr2P13320_001	Banana	nucleus, plastid	43.01	42.39
GSMUA_Achr5P00310_001	Banana	nucleus	13.6	41.11
GSMUA_Achr9P30700_001	Banana	mitochondrion	14.71	36.7
GSMUA_Achr10P...	Banana	nucleus	26.84	34.93
GSMUA_Achr1P22100_001	Banana	nucleus	27.94	34.7
GSMUA_Achr1P23970_001	Banana	nucleus	26.1	34.63
GSMUA_Achr2P18070_001	Banana	nucleus	33.82	34.2
GSMUA_Achr11P...	Banana	nucleus	29.78	34.18
GSMUA_Achr9P23320_001	Banana	nucleus	27.21	32.74
GSMUA_Achr10P...	Banana	nucleus	30.88	30.22
GSMUA_Achr3P00380_001	Banana	nucleus	28.68	29.77
GSMUA_AchrUn_...	Banana	nucleus	33.09	28.75
GSMUA_AchrUn_...	Banana	nucleus	34.19	28.62
GSMUA_Achr7P02420_001	Banana	nucleus	36.03	27.68
GSMUA_Achr8P30770_001	Banana	nucleus	34.56	26.48
GSMUA_Achr8P22900_001	Banana	nucleus	36.03	25.99
TraesCS5A01G402800.1	Wheat	mitochondrion, plastid	35.29	25.4
TraesCS5D01G412800.1	Wheat	mitochondrion, plastid	34.93	25.2
TraesCS5B01G407600.1	Wheat	plastid	34.93	24.93
Os03t0766500-01	Rice	mitochondrion	35.29	24.49
Zm00001d013187_P001	Maize	plastid	34.93	24.48
Zm00001d034181_P001	Maize	plastid	34.93	24.36
EER93393	Sorghum	mitochondrion, plastid	33.82	24.08
GSMUA_Achr4P04510_001	Banana	nucleus	33.09	24.0
GSMUA_AchrUn_...	Banana	nucleus	30.15	23.98
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	33.82	23.96
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	34.19	22.52
GSMUA_AchrUn_...	Banana	nucleus	32.35	22.22
GSMUA_Achr11P...	Banana	nucleus	18.75	21.79
GSMUA_Achr7P03510_001	Banana	nucleus	14.34	18.93
GSMUA_Achr4P25920_001	Banana	nucleus	16.18	17.74
GSMUA_Achr5P19200_001	Banana	nucleus	17.65	16.78
GSMUA_Achr2P11010_001	Banana	nucleus	18.01	16.78
GSMUA_AchrUn_...	Banana	nucleus	17.65	16.27
GSMUA_Achr7P22410_001	Banana	nucleus	19.85	16.27
GSMUA_Achr7P09370_001	Banana	nucleus	19.49	14.02
GSMUA_Achr7P13880_001	Banana	nucleus	18.38	12.2
GSMUA_Achr10P...	Banana	nucleus	22.43	11.78

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0030312	GO:GO:0044212
GO:GO:0048481	GO:GO:0080060	EnsemblPlantsGene:GSMUA_Achr4G23160_001	EnsemblPlants:GSMUA_Achr4P23160_001	EnsemblPlants:GSMUA_Achr4T23160_001	InterPro:Homeobox-like_sf
UniProt:M0SRC7	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF12	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000295364B	SEG:seg	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G23160_001]

Coordinates

chr4:-:23347659..23351415

Molecular Weight (calculated)

29939.5 Da

IEP (calculated)

9.326

GRAVY (calculated)

-0.585

Length

272 amino acids

Sequence
(BLAST)

001: MSTIYPDLSL HISPPSVSLN HAEPRLSLGL QSPGSSLSNH HEKLHRPQIC GFKRSSRSAH GGKRSVRAPR MRWTSTLHAH FVHAVKLLGG HERATPKSVL
101: ELMNVKDLTL AHVKSHLQMY RTVKSTDRGE AGQGQADMGI SQRTGMEEVE GGLPCDKAGS EITSSYHSLS TPTPPTTQVK SPREMYPSAE RHAWNPSIKQ
201: NGLAYPFFRS DDLLSNDYQA LVEDQPQALT QSQEQRLNLV PNSIGAAHTK MPDLEISLGS HDASKMLVNY IA

Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.