Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P18070_001 | Banana | nucleus | 70.89 | 62.45 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 43.46 | 50.24 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 33.33 | 46.75 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 40.93 | 42.92 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 46.41 | 41.98 |
| GSMUA_Achr10P... | Banana | nucleus | 48.1 | 41.01 |
| KRH74367 | Soybean | nucleus | 46.84 | 40.22 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 15.19 | 40.0 |
| CDX84102 | Canola | nucleus | 43.88 | 38.38 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 35.87 | 37.95 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 34.6 | 37.44 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 16.46 | 35.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.15 | 34.19 |
| GSMUA_Achr10P... | Banana | nucleus | 29.54 | 33.49 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 35.02 | 33.07 |
| Bra023254.1-P | Field mustard | nucleus | 50.21 | 32.51 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 37.13 | 31.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.57 | 31.58 |
| KRH39575 | Soybean | nucleus | 51.48 | 31.28 |
| AT1G32240.1 | Thale cress | nucleus | 51.05 | 31.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.62 | 31.08 |
| Bra033844.1-P | Field mustard | nucleus | 50.63 | 30.61 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 34.18 | 29.78 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 50.21 | 28.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.68 | 28.54 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 42.19 | 28.25 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 43.04 | 27.2 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 42.62 | 26.79 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 40.08 | 26.76 |
| PGSC0003DMT400034663 | Potato | nucleus | 46.84 | 24.67 |
| KRG97985 | Soybean | nucleus | 49.37 | 24.58 |
| Solyc11g011770.1.1 | Tomato | nucleus | 46.84 | 24.03 |
| KRH30907 | Soybean | nucleus | 49.37 | 23.17 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 16.88 | 19.42 |
| GSMUA_Achr11P... | Banana | nucleus | 18.99 | 19.23 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 18.14 | 17.34 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 20.68 | 17.13 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 19.83 | 16.1 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 22.36 | 15.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.83 | 15.93 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 21.94 | 13.76 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 23.63 | 13.66 |
| GSMUA_Achr10P... | Banana | nucleus | 24.47 | 11.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G17900_001 |
| EnsemblPlants:GSMUA_Achr11P17900_001 | EnsemblPlants:GSMUA_Achr11T17900_001 | InterPro:Homeobox-like_sf | UniProt:M0RT70 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00029624E0 | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G17900_001]
Coordinates
chr11:+:19457395..19458545
Molecular Weight (calculated)
26500.5 Da
IEP (calculated)
10.441
GRAVY (calculated)
-0.435
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MELFPAHPDL SLQISPPNSK PTASWSRTAD GNLGLGPIMP IRGVPVYHRP PAFHFGLRNR QHQPHPCDST SPSRSTPRLL PRFPAKRSTR APRMRWTTTL
101: HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTSD RQAASPGTAA SMSFGQAEFI EFSDDNLLEI QGPGASTQQG RSNGDRGTND
201: HGSWSNSARC RICINIFISA QFFYSKSYFF FLIDLFL
101: HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTSD RQAASPGTAA SMSFGQAEFI EFSDDNLLEI QGPGASTQQG RSNGDRGTND
201: HGSWSNSARC RICINIFISA QFFYSKSYFF FLIDLFL
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.