Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 23.73 | 49.7 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 27.12 | 46.83 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 49.15 | 46.15 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 26.55 | 42.92 |
| GSMUA_Achr11P... | Banana | nucleus | 28.25 | 42.19 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 31.92 | 42.01 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 25.99 | 41.07 |
| GSMUA_Achr10P... | Banana | nucleus | 32.2 | 41.01 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 29.94 | 40.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.01 | 40.31 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 25.71 | 40.27 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 38.98 | 38.87 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 9.6 | 37.78 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 27.68 | 36.03 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 27.97 | 35.87 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 11.02 | 35.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.36 | 35.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.9 | 35.09 |
| GSMUA_Achr10P... | Banana | nucleus | 20.62 | 34.93 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 24.58 | 34.66 |
| HORVU7Hr1G070420.2 | Barley | nucleus | 16.1 | 34.13 |
| Zm00001d049511_P001 | Maize | nucleus | 32.77 | 33.43 |
| TraesCS7D01G294400.1 | Wheat | nucleus | 32.77 | 33.43 |
| TraesCS7B01G200700.1 | Wheat | nucleus, plastid | 32.49 | 33.14 |
| TraesCS7A01G298700.1 | Wheat | nucleus | 32.2 | 33.04 |
| Zm00001d024532_P001 | Maize | nucleus | 33.05 | 32.87 |
| Os08t0160300-00 | Rice | nucleus | 30.79 | 31.59 |
| EES13398 | Sorghum | nucleus | 33.33 | 31.38 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 36.44 | 31.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.33 | 29.8 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 31.07 | 29.33 |
| GSMUA_Achr11P... | Banana | nucleus | 13.84 | 20.94 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 11.86 | 20.39 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 16.95 | 18.07 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 14.41 | 17.83 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 11.86 | 16.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.84 | 16.61 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 12.99 | 15.75 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 16.38 | 15.34 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 16.95 | 14.63 |
| GSMUA_Achr10P... | Banana | nucleus | 18.36 | 12.55 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr7G02420_001 |
| EnsemblPlants:GSMUA_Achr7P02420_001 | EnsemblPlants:GSMUA_Achr7T02420_001 | InterPro:Homeobox-like_sf | UniProt:M0TE32 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00029557CB | SEG:seg |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_43.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G02420_001]
Coordinates
chr7:-:1899695..1903476
Molecular Weight (calculated)
39941.7 Da
IEP (calculated)
7.231
GRAVY (calculated)
-0.688
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAISTSSPD LSLHISPPNA ASSSYADAGI GADHDKLHRE IRAVEWHTGG GNEAYTELSL SYPSAVSEAE SPWRQQRLSV QRSPLPFDHC HSNQRALEGL
101: MDGSRPIKGI PIYNNSPFPF LHLFHPQQQH YHYNNQYGIG SFEASHNMMR SRFMPKLPAK RNIRAPRMRW TSTLHARFVH AVELLGGHER ATPKSVLELM
201: DVKDLTLAHV KSHLQMYRTL KTTDKPPGQS DGSGEEDFAA GNPDLNFRQL MEQRASDGTK PTQDLDFPPS ITNTTSRWSN SSRQAYSFSL WGGVSWQLLL
301: LSPPLQCLRS HWERMVLDGD TYRSNASQVA HLEHKNPSLE FTLGRPDWDA TEHV
101: MDGSRPIKGI PIYNNSPFPF LHLFHPQQQH YHYNNQYGIG SFEASHNMMR SRFMPKLPAK RNIRAPRMRW TSTLHARFVH AVELLGGHER ATPKSVLELM
201: DVKDLTLAHV KSHLQMYRTL KTTDKPPGQS DGSGEEDFAA GNPDLNFRQL MEQRASDGTK PTQDLDFPPS ITNTTSRWSN SSRQAYSFSL WGGVSWQLLL
301: LSPPLQCLRS HWERMVLDGD TYRSNASQVA HLEHKNPSLE FTLGRPDWDA TEHV
001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
Arabidopsis Description
KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.