Factsheet for Zm00001d049511_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024532_P001	Maize	nucleus	89.34	87.08
EES13398	Sorghum	nucleus	90.49	83.51
HORVU7Hr1G070420.2	Barley	nucleus	36.89	76.65
Os08t0160300-00	Rice	nucleus	71.47	71.88
TraesCS7A01G298700.1	Wheat	nucleus	66.28	66.67
TraesCS7B01G200700.1	Wheat	nucleus, plastid	65.99	65.99
TraesCS7D01G294400.1	Wheat	nucleus	65.71	65.71
GSMUA_Achr10P...	Banana	nucleus	42.65	53.24
Zm00001d041376_P001	Maize	nucleus	17.29	38.96
PGSC0003DMT400038366	Potato	nucleus	28.82	38.76
Solyc08g076400.2.1	Tomato	nucleus	27.95	36.88
Zm00001d030911_P001	Maize	cytosol	17.58	34.27
Zm00001d048448_P001	Maize	nucleus	11.24	33.62
GSMUA_Achr7P02420_001	Banana	nucleus	33.43	32.77
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	30.84	28.53
Zm00001d017702_P001	Maize	peroxisome	30.55	27.89
Zm00001d020384_P001	Maize	nucleus	36.89	25.3
Zm00001d034181_P001	Maize	plastid	27.38	24.36
Zm00001d013187_P001	Maize	plastid	26.22	23.45
Zm00001d020382_P001	Maize	nucleus, plastid	6.92	22.43
Zm00001d032249_P002	Maize	plastid	30.84	22.2
Zm00001d046981_P001	Maize	nucleus	12.97	21.33
Zm00001d033310_P001	Maize	nucleus	22.77	18.33
Zm00001d036638_P001	Maize	nucleus	13.54	17.67
Zm00001d005087_P001	Maize	nucleus	14.7	14.66
Zm00001d017563_P002	Maize	nucleus	14.41	14.45
Zm00001d002649_P001	Maize	nucleus	12.1	12.8
Zm00001d026106_P001	Maize	nucleus	11.82	11.95
Zm00001d046174_P001	Maize	nucleus	17.29	11.3
Zm00001d027492_P001	Maize	mitochondrion	13.83	11.06
Zm00001d037015_P001	Maize	nucleus	17.58	11.01
Zm00001d016175_P001	Maize	nucleus	16.14	10.37

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100502477	MapMan:15.5.2.3	ProteinID:AQK50690.1	EMBL:BT088311	UniProt:C4JBW4
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF4	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0001A4BE79
EnsemblPlantsGene:Zm00001d049511	EnsemblPlants:Zm00001d049511_P001	EnsemblPlants:Zm00001d049511_T001	SEG:seg	:	:

Description

G2-like-transcription factor 22Putative MYB DNA-binding domain superfamily protein

Coordinates

chr4:-:32889820..32894110

Molecular Weight (calculated)

36489.1 Da

IEP (calculated)

7.887

GRAVY (calculated)

-0.312

Length

347 amino acids

Sequence
(BLAST)

001: MELFPSQPDL SLQIGLPARA TSHHHGAALS ARLLAAAAGG SVGGGNGVPG NPAAAMAPSL QVPIPIPLQL PLPMPPNAAA MLRPIRGVPL YQHPHTHAVP
101: PTFPPHAAGA GPCFCEPCHV AAGAWRRAGC GFGARVAGLF PPAKRAARAP RMRWTSTLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM
201: YRTVKNTERP AASSDQADGF ESGSSSAGEI CDDDNSSLDL HGTDGRRPES SSAVRHGRLT ACNDHGSSTG AHGGALWNSS SREDWAGFPS DSNTGSMSMH
301: SRSLKDQTMQ SKSLEILSDM NSSCVSETTS CASELNLEFT LGPRIRH

Best Arabidopsis Sequence Match ( AT4G17695.1 )
(BLAST)

001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP

Arabidopsis Description

KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.