Factsheet for Zm00001d027492_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40258	Sorghum	nucleus	69.12	73.89
Zm00001d048448_P001	Maize	nucleus	19.35	72.41
TraesCS5A01G496100.1	Wheat	nucleus	39.86	45.77
HORVU4Hr1G082560.1	Barley	plastid	40.09	45.55
TraesCS4B01G323600.1	Wheat	nucleus	39.4	44.65
TraesCS4D01G320400.1	Wheat	nucleus	39.86	40.33
Zm00001d046981_P001	Maize	nucleus	14.98	30.81
Zm00001d036638_P001	Maize	nucleus	16.13	26.32
Zm00001d041376_P001	Maize	nucleus	8.29	23.38
Zm00001d002649_P001	Maize	nucleus	16.36	21.65
Zm00001d017563_P002	Maize	nucleus	17.05	21.39
Zm00001d026106_P001	Maize	nucleus	16.13	20.41
Zm00001d030911_P001	Maize	cytosol	8.06	19.66
Zm00001d005087_P001	Maize	nucleus	15.21	18.97
Zm00001d016175_P001	Maize	nucleus	18.66	15.0
Zm00001d046174_P001	Maize	nucleus	17.74	14.5
Zm00001d034181_P001	Maize	plastid	12.44	13.85
Zm00001d049511_P001	Maize	nucleus	11.06	13.83
Zm00001d024532_P001	Maize	nucleus	11.29	13.76
Zm00001d037015_P001	Maize	nucleus	16.82	13.18
Zm00001d013187_P001	Maize	plastid	11.52	12.89
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	10.6	12.27
Zm00001d017702_P001	Maize	peroxisome	10.6	12.11
Zm00001d033310_P001	Maize	nucleus	11.52	11.6
Zm00001d020384_P001	Maize	nucleus	12.21	10.47
Zm00001d020382_P001	Maize	nucleus, plastid	2.53	10.28
Zm00001d032249_P002	Maize	plastid	11.29	10.17

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100275291	MapMan:15.5.2.3	EMBL:BT068910	UniProt:C0PKU1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
ProteinID:ONL93279.1	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000195D410	EnsemblPlantsGene:Zm00001d027492	EnsemblPlants:Zm00001d027492_P001	EnsemblPlants:Zm00001d027492_T001
SEG:seg	:	:	:	:	:

Description

G2-like-transcription factor 48Putative Myb family transcription factor

Coordinates

chr1:-:6524381..6529576

Molecular Weight (calculated)

46205.9 Da

IEP (calculated)

8.403

GRAVY (calculated)

-0.563

Length

434 amino acids

Sequence
(BLAST)

001: MTMVRTTMVG ARERSGGVRQ YNRSKVPRLR WTPDLHHCFV HAIHKLGGQD KATPKRVLQL MGVGGLTISH VKSHLQMYRN MRNDLGMQGT TMQLVHRAEE
101: HVYGLGGMHM ELCADTQRRQ PQCGHDECDG PACCCIVVCR SPPPPKPGKE ATTLFQRQLK SVFAMEEPNN SGAGRRRERE EMDGSASPKR VLLRGGPGPG
201: TCEGDGSPSP PSASGGLCWA LATAAAGGYN SYMRMMQAAM GMAAGARAPP PRTLRHPPRH AETTVEPSRG PGIKRQAQMQ SASARPGAQG GEHAAPALRP
301: RSTSSSEQLI TFSGFVVAQK QPPPPPPPCC SRDHPFEMVG TALIAHGASA EARCGLETPP RLPAVAEQAG GDPCWTSSAG SEDDHDEEED GCSLSLSLAT
401: RSSRSSGDEG GRLSPTAATS WGSQISLDLS LSTL

Best Arabidopsis Sequence Match ( AT2G02060.1 )
(BLAST)

001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.