Factsheet for Zm00001d024532_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049511_P001	Maize	nucleus	87.08	89.34
EES13398	Sorghum	nucleus	94.1	89.1
HORVU7Hr1G070420.2	Barley	nucleus	35.39	75.45
Os08t0160300-00	Rice	nucleus	72.47	74.78
TraesCS7A01G298700.1	Wheat	nucleus	69.38	71.59
TraesCS7B01G200700.1	Wheat	nucleus, plastid	69.38	71.18
TraesCS7D01G294400.1	Wheat	nucleus	69.1	70.89
GSMUA_Achr10P...	Banana	nucleus	42.7	54.68
PGSC0003DMT400038366	Potato	nucleus	28.93	39.92
Zm00001d041376_P001	Maize	nucleus	16.85	38.96
Solyc08g076400.2.1	Tomato	nucleus	28.09	38.02
Zm00001d030911_P001	Maize	cytosol	17.7	35.39
Zm00001d048448_P001	Maize	nucleus	11.24	34.48
GSMUA_Achr7P02420_001	Banana	nucleus	32.87	33.05
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	29.78	28.27
Zm00001d017702_P001	Maize	peroxisome	29.49	27.63
Zm00001d020384_P001	Maize	nucleus	37.36	26.28
Zm00001d034181_P001	Maize	plastid	26.4	24.1
Zm00001d013187_P001	Maize	plastid	26.12	23.97
Zm00001d032249_P002	Maize	plastid	31.18	23.03
Zm00001d020382_P001	Maize	nucleus, plastid	6.74	22.43
Zm00001d046981_P001	Maize	nucleus	12.64	21.33
Zm00001d033310_P001	Maize	nucleus	22.47	18.56
Zm00001d036638_P001	Maize	nucleus	13.2	17.67
Zm00001d005087_P001	Maize	nucleus	14.33	14.66
Zm00001d017563_P002	Maize	nucleus	13.76	14.16
Zm00001d002649_P001	Maize	nucleus	11.8	12.8
Zm00001d026106_P001	Maize	nucleus	11.52	11.95
Zm00001d027492_P001	Maize	mitochondrion	13.76	11.29
Zm00001d046174_P001	Maize	nucleus	16.57	11.11
Zm00001d037015_P001	Maize	nucleus	17.13	11.01
Zm00001d016175_P001	Maize	nucleus	15.45	10.19

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100281529	MapMan:15.5.2.3	ProteinID:AQK41442.1	UniProt:B6SW93	EMBL:EU957008
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF4	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000182BCD6
EnsemblPlantsGene:Zm00001d024532	EnsemblPlants:Zm00001d024532_P001	EnsemblPlants:Zm00001d024532_T001	SEG:seg	:	:

Description

G2-like-transcription factor 55KANADI-like transcription factor FEATHERED%3B Putative MYB DNA-binding domain superfamily protein

Coordinates

chr10:-:76729754..76734531

Molecular Weight (calculated)

37357.4 Da

IEP (calculated)

7.705

GRAVY (calculated)

-0.271

Length

356 amino acids

Sequence
(BLAST)

001: MELFPSQPDL SLQIGLPASA TPHDHHHGAA LSARFLAAAA GGGGNGIPGN PAVAMAPSLQ LPMPMPLPMP MPMPPNAAAA AGAAGGLYYH PDAAAMLRPI
101: RGVPLYQHPH THAVPPTFPP HAAGAAGPCF CEPCHVAAGA WRRAGCGVGT RVVAGFPTAA KRAARAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL
201: MDVKDLTLAH VKSHLQMYRT VKNTERPAAS SDLADGFENG SAGEICDDNS LDLHGAGRPE SGAARHGRLA ACNDHGSSTG AHGALWNSSS REDWTGFPSE
301: SNTGRMSMHS RSLKDQTMQS KSLEILSDMN SSCVSETTSC ASELNLEFTL GPRIRH

Best Arabidopsis Sequence Match ( AT1G32240.1 )
(BLAST)

001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH

Arabidopsis Description

KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.