Factsheet for Zm00001d033310_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91215	Sorghum	nucleus	76.1	76.81
Os03t0624000-00	Rice	nucleus	25.52	60.44
Zm00001d041376_P001	Maize	nucleus	21.11	59.09
Zm00001d030911_P001	Maize	cytosol	22.27	53.93
GSMUA_Achr10P...	Banana	nucleus	16.94	34.93
GSMUA_Achr4P32400_001	Banana	plastid	18.79	32.27
Zm00001d048448_P001	Maize	nucleus	8.35	31.03
Zm00001d013187_P001	Maize	plastid	25.99	28.87
Zm00001d034181_P001	Maize	plastid	25.52	28.21
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	21.58	24.8
Zm00001d017702_P001	Maize	peroxisome	20.42	23.16
Zm00001d049511_P001	Maize	nucleus	18.33	22.77
Zm00001d024532_P001	Maize	nucleus	18.56	22.47
Zm00001d046981_P001	Maize	nucleus	9.28	18.96
Zm00001d020384_P001	Maize	nucleus	21.58	18.38
Zm00001d032249_P002	Maize	plastid	19.26	17.22
Zm00001d036638_P001	Maize	nucleus	10.44	16.92
Zm00001d017563_P002	Maize	nucleus	12.76	15.9
Zm00001d020382_P001	Maize	nucleus, plastid	3.94	15.89
Zm00001d005087_P001	Maize	nucleus	12.76	15.8
Zm00001d002649_P001	Maize	nucleus	10.9	14.33
Zm00001d026106_P001	Maize	nucleus	10.9	13.7
Zm00001d027492_P001	Maize	mitochondrion	11.6	11.52
Zm00001d046174_P001	Maize	nucleus	14.15	11.49
Zm00001d037015_P001	Maize	nucleus	14.39	11.19
Zm00001d016175_P001	Maize	nucleus	13.92	11.11

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A1D6KXN3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	ProteinID:ONM07208.1	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF12
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0008446FC7	EnsemblPlantsGene:Zm00001d033310	EnsemblPlants:Zm00001d033310_P001
EnsemblPlants:Zm00001d033310_T001	SEG:seg	:	:	:	:

Description

G2-like-transcription factor 23Probable transcription factor KAN4

Coordinates

chr1:-:258515868..258524876

Molecular Weight (calculated)

45769.5 Da

IEP (calculated)

9.735

GRAVY (calculated)

-0.603

Length

431 amino acids

Sequence
(BLAST)

001: MATTTAAAPD LSLHISPPSP PDDARSSDVL FSKQTLCLGL VQTTTAAAHD QDGQCDDVQQ QQRQRLHQQP SQIQRFKKTS SSSAALLSAG GGTTRSGNGN
101: SGGGKRSSRA PRMRWTTALH AHFVHAVELL GGHERATPKS VLELMNVKDL TLAHVKSHLQ ANVSNSEGND GRQIMCCSIS SHVQMRDMGF LHRGCELNGF
201: EAFSNGTSNA TANNRMQAAA GSPAGKHAEV AWFLRPPLAH QSSGGGGGGG AVPLPLPLPC PYLMSAHHNR YLLSQNQGWR TRGAHQQDAA APPPLVLGQQ
301: DSARRLHPGF PDTAISSSRP SSWSAGVASR WSSSTAAAPS PSSGRSSISS GTEQPAACSW TMMTTNKQQQ QPPPSTSSSS RVVAVPNLEM SLGRQGWQHD
401: LQDHHPQQQQ QQRSGESTAP KELTPGLLKC L

Best Arabidopsis Sequence Match ( AT5G42630.2 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRL LFIYIFIFVK FCI

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.