Factsheet for Zm00001d048448_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046981_P001	Maize	nucleus	42.24	23.22
Zm00001d041376_P001	Maize	nucleus	30.17	22.73
KXG40258	Sorghum	nucleus	75.0	21.43
TraesCS5A01G496100.1	Wheat	nucleus	64.66	19.84
Zm00001d030911_P001	Maize	cytosol	30.17	19.66
HORVU4Hr1G082560.1	Barley	plastid	64.66	19.63
TraesCS4B01G323600.1	Wheat	nucleus	64.66	19.58
Zm00001d027492_P001	Maize	mitochondrion	72.41	19.35
Zm00001d036638_P001	Maize	nucleus	41.38	18.05
TraesCS4D01G320400.1	Wheat	nucleus	63.79	17.25
Zm00001d017563_P002	Maize	nucleus	44.83	15.03
Zm00001d002649_P001	Maize	nucleus	41.38	14.63
Zm00001d005087_P001	Maize	nucleus	43.1	14.37
Zm00001d026106_P001	Maize	nucleus	41.38	13.99
Zm00001d049511_P001	Maize	nucleus	33.62	11.24
Zm00001d024532_P001	Maize	nucleus	34.48	11.24
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	35.34	10.93
Zm00001d017702_P001	Maize	peroxisome	35.34	10.79
Zm00001d013187_P001	Maize	plastid	35.34	10.57
Zm00001d034181_P001	Maize	plastid	35.34	10.51
Zm00001d016175_P001	Maize	nucleus	46.55	10.0
Zm00001d032249_P002	Maize	plastid	41.38	9.96
Zm00001d046174_P001	Maize	nucleus	44.83	9.79
Zm00001d037015_P001	Maize	nucleus	45.69	9.57
Zm00001d020384_P001	Maize	nucleus	37.07	8.5
Zm00001d033310_P001	Maize	nucleus	31.03	8.35
Zm00001d020382_P001	Maize	nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A1D6PKN5	ProteinID:AQL09806.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	TMHMM:TMhelix	UniParc:UPI0008431692	EnsemblPlantsGene:Zm00001d048448	EnsemblPlants:Zm00001d048448_P001
EnsemblPlants:Zm00001d048448_T001	:	:	:	:	:

Description

G2-like-transcription factor 30Putative MYB DNA-binding domain superfamily protein

Coordinates

chr9:+:156609608..156610275

Molecular Weight (calculated)

13368.6 Da

IEP (calculated)

11.681

GRAVY (calculated)

-0.252

Length

116 amino acids

Sequence
(BLAST)

001: MVRTTVVGRE RSGGVRQYNR SKVPRLRWTP DLHHCFVHAI HKLGGPDRAT PKRVLQLMGV GGLTISHVKS HLQVLSRTWS RIMVFISFCY LLQLTSIYGM
101: YRNMRNDLGM QGTYPK

Best Arabidopsis Sequence Match ( AT2G40260.1 )
(BLAST)

001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.