Factsheet for Zm00001d002649_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11274	Sorghum	nucleus	75.3	79.17
Zm00001d026106_P001	Maize	nucleus	74.09	70.85
Os04t0566600-01	Rice	extracellular	56.1	60.13
TraesCS2A01G402700.1	Wheat	nucleus	50.91	56.42
TraesCS2D01G400100.2	Wheat	mitochondrion, nucleus	50.0	56.16
TraesCS2B01G420900.1	Wheat	mitochondrion, nucleus	49.39	55.29
HORVU2Hr1G095530.2	Barley	nucleus	50.3	55.0
Zm00001d048448_P001	Maize	nucleus	14.63	41.38
Zm00001d017563_P002	Maize	nucleus	38.72	36.71
Zm00001d046981_P001	Maize	nucleus	18.6	28.91
Zm00001d036638_P001	Maize	nucleus	18.29	22.56
Zm00001d041376_P001	Maize	nucleus	9.76	20.78
Zm00001d005087_P001	Maize	nucleus	21.04	19.83
Zm00001d030911_P001	Maize	cytosol	9.15	16.85
Zm00001d027492_P001	Maize	mitochondrion	21.65	16.36
Zm00001d046174_P001	Maize	nucleus	21.34	13.18
Zm00001d037015_P001	Maize	nucleus	21.95	13.0
Zm00001d016175_P001	Maize	nucleus	21.04	12.78
Zm00001d034181_P001	Maize	plastid	14.94	12.56
Zm00001d017702_P001	Maize	peroxisome	14.33	12.37
Zm00001d051527_P001	Maize	cytosol, nucleus, peroxisome, plastid	14.02	12.27
Zm00001d049511_P001	Maize	nucleus	12.8	12.1
Zm00001d013187_P001	Maize	plastid	14.02	11.86
Zm00001d024532_P001	Maize	nucleus	12.8	11.8
Zm00001d033310_P001	Maize	nucleus	14.33	10.9
Zm00001d020382_P001	Maize	nucleus, plastid	3.35	10.28
Zm00001d032249_P002	Maize	plastid	14.33	9.75
Zm00001d020384_P001	Maize	nucleus	14.94	9.68

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100217256	MapMan:35.1	UniProt:A0A1D6E2U7	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	ProteinID:ONM14917.1
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF6	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI000842A550	EnsemblPlantsGene:Zm00001d002649	EnsemblPlants:Zm00001d002649_P001	EnsemblPlants:Zm00001d002649_T001	SEG:seg

Description

G2-like-transcription factor 37Putative Myb family transcription factor

Coordinates

chr2:-:18092188..18095739

Molecular Weight (calculated)

35005.3 Da

IEP (calculated)

9.047

GRAVY (calculated)

-0.543

Length

328 amino acids

Sequence
(BLAST)

001: MGSGRNGAVV RRYVRSKEPR MRWSADLHRS FVQAIDSLGG QHKATPKLIL QFMGARGLTI SHVKSHLQMY RAASLGAERG GDFANGKPNT FLSWHHRSGT
101: PAQLLQRRYS CSGDERGGPK EEFLCCPPPP PLKRARMGYE SMQGSHGVSD ARTTAGGGGL YCIDDYMQAM AVGWRIKEEG LIRWQRRDAA AATPSNLQAM
201: GCLVQESGPF KVRRPEAHRL GSALKQQDGD DSSKEDGNDG RPQSSNAATK EDEASEQCSL SLSLGNLDAK CGRGMAAAAS SRSGESSCIL TASPARRSSS
301: DCSGHSGCFV VGPGGVVSLE LSLSICGS

Best Arabidopsis Sequence Match ( AT4G04605.1 )
(BLAST)

001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA

Arabidopsis Description

Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.