Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G420900.1 | Wheat | mitochondrion, nucleus | 88.51 | 89.42 |
| TraesCS2D01G400100.2 | Wheat | mitochondrion, nucleus | 87.5 | 88.7 |
| HORVU2Hr1G095530.2 | Barley | nucleus | 83.11 | 82.0 |
| Os04t0566600-01 | Rice | extracellular | 58.78 | 56.86 |
| EES11274 | Sorghum | nucleus | 59.46 | 56.41 |
| Zm00001d002649_P001 | Maize | nucleus | 56.42 | 50.91 |
| Zm00001d026106_P001 | Maize | nucleus | 54.39 | 46.94 |
| TraesCS7A01G470100.1 | Wheat | nucleus | 21.62 | 25.4 |
| TraesCS7A01G469900.1 | Wheat | nucleus | 19.93 | 23.69 |
| TraesCS7A01G470200.1 | Wheat | nucleus | 19.59 | 23.58 |
| TraesCS6A01G254700.1 | Wheat | nucleus | 21.28 | 20.79 |
| TraesCS1A01G202500.1 | Wheat | nucleus | 23.99 | 20.11 |
| TraesCS5A01G153000.1 | Wheat | nucleus | 21.28 | 19.33 |
| TraesCS5A01G496100.1 | Wheat | nucleus | 22.97 | 17.99 |
| TraesCS4A01G180900.1 | Wheat | nucleus | 20.27 | 17.6 |
| TraesCS4A01G242600.1 | Wheat | nucleus | 19.59 | 15.63 |
| TraesCS6A01G007300.1 | Wheat | nucleus | 17.23 | 15.36 |
| TraesCS7A01G298700.1 | Wheat | nucleus | 17.23 | 14.78 |
| TraesCS5A01G402800.1 | Wheat | mitochondrion, plastid | 18.24 | 14.29 |
| TraesCS5A01G064700.1 | Wheat | nucleus | 16.55 | 14.04 |
| TraesCS6A01G266400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 16.55 | 13.8 |
| TraesCS6A01G109700.1 | Wheat | nucleus | 21.62 | 13.42 |
| TraesCS7A01G345200.2 | Wheat | nucleus | 22.97 | 13.15 |
| TraesCS5A01G203200.1 | Wheat | nucleus | 16.89 | 11.04 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G402700.1 | EnsemblPlantsGene:TraesCS2A01G402700 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | InterPro:SANT/Myb | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF6 |
| PFAM:PF00249 | SEG:seg | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2A:-:656965367..656968263
Molecular Weight (calculated)
32036.2 Da
IEP (calculated)
9.483
GRAVY (calculated)
-0.641
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSGKKQEA VRRYVRSRAP RMQWTAELHR SFLQAIECLG GEHNATPKLV LQVMGVKELT ISHVKSHLQM YRGPSTRKAK KETEPQLLQR RHSCAADEQQ
101: GGGGPNAPFM CPPLKRARTT GTEAADKGMQ GGQSQGISGT KTSGAVNRYC IDDYYSMQAM AMERRIMEGL SCQRDAAAAV SSLRTVGCLE QGSGDFKIIK
201: PEAHYYPGLA VKKQDPKEKP KEKDSNGAEQ CSLSLSLGPD PRCLRAVSSS SPSEGSCIIS SSSSPPRRRR SSSHCSGHSG CFDAQGVNLE LSLSIC
101: GGGGPNAPFM CPPLKRARTT GTEAADKGMQ GGQSQGISGT KTSGAVNRYC IDDYYSMQAM AMERRIMEGL SCQRDAAAAV SSLRTVGCLE QGSGDFKIIK
201: PEAHYYPGLA VKKQDPKEKP KEKDSNGAEQ CSLSLSLGPD PRCLRAVSSS SPSEGSCIIS SSSSPPRRRR SSSHCSGHSG CFDAQGVNLE LSLSIC
001: MQDPMVRSYI RSDNPRMHWT DDLDIRFIQV IEKLGGEESA TPKRILSLMG VRDLTISHVK SHLQMYRNKK KEESSKEIKM MREMTQRQSQ QYLQIYERAT
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XEB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.