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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • mitochondrion 4
  • nucleus 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G402700.1 Wheat nucleus 88.7 87.5
TraesCS2B01G420900.1 Wheat mitochondrion, nucleus 85.96 85.67
HORVU2Hr1G095530.2 Barley nucleus 82.19 80.0
Os04t0566600-01 Rice extracellular 59.59 56.86
EES11274 Sorghum nucleus 59.59 55.77
Zm00001d002649_P001 Maize nucleus 56.16 50.0
Zm00001d026106_P001 Maize nucleus 55.14 46.94
TraesCS7D01G457600.1 Wheat nucleus 21.23 25.1
TraesCS7D01G457400.1 Wheat nucleus 21.58 25.1
TraesCS7D01G457300.1 Wheat nucleus 21.23 24.8
TraesCS7D01G457500.1 Wheat nucleus 19.86 23.58
TraesCS6D01G236000.1 Wheat mitochondrion 22.6 21.71
TraesCS5D01G158300.1 Wheat nucleus 21.58 19.44
TraesCS1D01G205800.1 Wheat nucleus 22.95 19.03
TraesCS4D01G131500.1 Wheat nucleus 20.55 17.6
TraesCS4D01G320400.1 Wheat nucleus 22.6 15.38
TraesCS6D01G011600.1 Wheat nucleus 17.47 15.36
TraesCS4D01G071300.1 Wheat nucleus 19.18 15.09
TraesCS7D01G294400.1 Wheat nucleus 17.81 14.99
TraesCS7D01G334100.1 Wheat nucleus 25.68 14.51
TraesCS6D01G248300.1 Wheat cytosol, nucleus, peroxisome, plastid 17.12 14.01
TraesCS5D01G412800.1 Wheat mitochondrion, plastid 17.47 13.53
TraesCS6D01G098200.1 Wheat nucleus 21.58 13.26
TraesCS5D01G075600.1 Wheat nucleus 15.41 13.12
TraesCS5D01G209600.1 Wheat nucleus, plastid 16.78 10.91
Protein Annotations
EnsemblPlants:TraesCS2D01G400100.2EnsemblPlantsGene:TraesCS2D01G400100Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:Myb_dom_plantsInterPro:SANT/MybPANTHER:PTHR31314PANTHER:PTHR31314:SF6
PFAM:PF00249SEG:segSUPFAM:SSF46689TIGRFAMs:TIGR01557MapMan:35.1:
Description
No Description!
Coordinates
chr2D:-:513102683..513105574
Molecular Weight (calculated)
31333.3 Da
IEP (calculated)
9.420
GRAVY (calculated)
-0.543
Length
292 amino acids
Sequence
(BLAST)
001: MGSSAKKQEA VRRYVRSRAP RMQWTAELHR SFLQAIECLG GEHNATPKLV LKVMGVKELT ISHVKSHLQM YRGPSTRKAK REAQPGLQRR HSCAADEQGG
101: APFMCPPLKR ARTGAGTEAA GEGMQGGQSQ GISGMKTSGA VNPYCIDDYY MQAMAMERRI MEGLSGWQRD AAAAAAVSDL RTVGCLEQGS GDFKIIKPEA
201: HHYYPGLAVK KQGPKEKDGN GTEQCSLSLS LGLDPRCLRA AVSSSSPSEG SCIVSSSPPP RRRSSSHCSG HSGYSDTQGV NLDLSLSICG SY
Best Arabidopsis Sequence Match ( AT1G14600.1 )
(BLAST)
001: MGRCGRSNDG VIGGVRPYVR SPVPRLRWTP ELHRSFVHAV DLLGGQYKAT PKLVLKIMDV KGLTISHVKS HLQMYRGSRI TLLGKPEESS SPSSRRRRRQ
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS
Arabidopsis Description
Putative Myb family transcription factor At1g14600 [Source:UniProtKB/Swiss-Prot;Acc:Q700D9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.