Factsheet for TraesCS7D01G457400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G470100.1	Wheat	nucleus	92.03	91.67
TraesCS7B01G372000.1	Wheat	nucleus	81.67	82.0
TraesCS7D01G457300.1	Wheat	nucleus	78.88	79.2
TraesCS7D01G457600.1	Wheat	nucleus	68.92	70.04
HORVU7Hr1G107670.1	Barley	nucleus	68.92	69.76
TraesCS7D01G457500.1	Wheat	nucleus	68.13	69.51
VIT_12s0028g00980.t01	Wine grape	nucleus	16.73	58.33
OQU76857	Sorghum	nucleus	54.18	53.12
Os06t0670300-01	Rice	nucleus	51.79	50.78
GSMUA_Achr5P00310_001	Banana	nucleus	17.13	47.78
GSMUA_Achr9P30700_001	Banana	mitochondrion	20.72	47.71
GSMUA_Achr7P03510_001	Banana	nucleus	29.48	35.92
PGSC0003DMT400074183	Potato	mitochondrion	19.92	31.65
KRH14524	Soybean	nucleus	22.71	30.48
KRH73595	Soybean	nucleus	24.3	28.64
Solyc12g006280.1.1	Tomato	nucleus	19.52	28.16
PGSC0003DMT400002410	Potato	nucleus	21.91	25.46
TraesCS2D01G400100.2	Wheat	mitochondrion, nucleus	25.1	21.58
TraesCS6D01G236000.1	Wheat	mitochondrion	23.9	19.74
TraesCS1D01G205800.1	Wheat	nucleus	27.09	19.32
TraesCS5D01G158300.1	Wheat	nucleus	23.51	18.21
TraesCS4D01G131500.1	Wheat	nucleus	23.9	17.6
Solyc07g045000.2.1	Tomato	nucleus	11.95	17.05
TraesCS4D01G320400.1	Wheat	nucleus	26.29	15.38
TraesCS6D01G098200.1	Wheat	nucleus	29.08	15.37
TraesCS6D01G011600.1	Wheat	nucleus	19.92	15.06
TraesCS6D01G248300.1	Wheat	cytosol, nucleus, peroxisome, plastid	19.92	14.01
TraesCS7D01G294400.1	Wheat	nucleus	19.12	13.83
CDY69675	Canola	cytosol, nucleus	6.37	13.79
TraesCS5D01G075600.1	Wheat	nucleus	18.73	13.7
TraesCS7D01G334100.1	Wheat	nucleus	27.89	13.54
TraesCS5D01G412800.1	Wheat	mitochondrion, plastid	19.92	13.26
TraesCS4D01G071300.1	Wheat	nucleus	18.33	12.4
TraesCS5D01G209600.1	Wheat	nucleus, plastid	17.93	10.02
Zm00001d020382_P001	Maize	nucleus, plastid	3.59	8.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR31314	PANTHER:PTHR31314:SF2	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7D01G457400
EnsemblPlants:TraesCS7D01G457400.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:575741509..575743604

Molecular Weight (calculated)

27670.9 Da

IEP (calculated)

7.627

GRAVY (calculated)

-0.881

Length

251 amino acids

Sequence
(BLAST)

001: MRGFERRGVR QYNRSDEPRM RWTEELHRQF IEAVDCLGGQ DEATPKRILQ LMGAKEVSIS HVKSHLQMYR SSSSNTTCNG PPNASVDRRG GHRVVDEPRN
101: GHRNGNHMGA ASERIDDASS YPVPSHGHRS STPYQIPSIE EVFRSWEQSR GRLPWNSSMS SEKATGWACH ADRSTRQKQQ QQPAAGCDLT LSIGRWEAEA
201: ASSDADVSST TTEEAVAPAR DRGAGGHRRS ASATGLDLDL NLDLAISSSC L

Best Arabidopsis Sequence Match ( AT4G04580.1 )
(BLAST)

001: MQDPMVRSYI RSDNPRMHWT DDLDIRFIQV IEKLGGEESA TPKRILSLMG VRDLTISHVK SHLQMYRNKK KEESSKEIKM MREMTQRQSQ QYLQIYERAT
101: QFIQNQQRLQ LDNTEKITPV LGSSNKSLDQ SSKVGLNENR GNDVVVVGGA TGEEELSLEL TLGRKY

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XEB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.