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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G254700.1 Wheat nucleus 88.82 89.11
TraesCS6B01G270800.1 Wheat nucleus 90.79 86.79
HORVU6Hr1G064920.1 Barley mitochondrion 50.0 64.41
HORVU0Hr1G016420.1 Barley mitochondrion 49.67 63.98
TraesCS7D01G457600.1 Wheat nucleus 19.74 24.29
TraesCS7D01G457300.1 Wheat nucleus 19.74 24.0
TraesCS7D01G457500.1 Wheat nucleus 19.41 23.98
TraesCS7D01G457400.1 Wheat nucleus 19.74 23.9
TraesCS2D01G400100.2 Wheat mitochondrion, nucleus 21.71 22.6
KXG31083 Sorghum nucleus 22.7 21.56
TraesCS5D01G158300.1 Wheat nucleus 20.72 19.44
Zm00001d017563_P002 Maize nucleus 21.71 19.08
TraesCS4D01G131500.1 Wheat nucleus 21.05 18.77
TraesCS1D01G205800.1 Wheat nucleus 21.71 18.75
TraesCS4D01G320400.1 Wheat nucleus 23.03 16.32
TraesCS6D01G011600.1 Wheat nucleus 17.11 15.66
TraesCS5D01G075600.1 Wheat nucleus 17.11 15.16
TraesCS6D01G098200.1 Wheat nucleus 23.03 14.74
TraesCS6D01G248300.1 Wheat cytosol, nucleus, peroxisome, plastid 17.11 14.57
TraesCS7D01G294400.1 Wheat nucleus 16.45 14.41
TraesCS4D01G071300.1 Wheat nucleus 17.43 14.29
TraesCS5D01G412800.1 Wheat mitochondrion, plastid 16.12 13.0
TraesCS7D01G334100.1 Wheat nucleus 21.71 12.77
TraesCS5D01G209600.1 Wheat nucleus, plastid 17.43 11.8
Protein Annotations
EnsemblPlants:TraesCS6D01G236000.1EnsemblPlantsGene:TraesCS6D01G236000Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:Myb_dom_plantsInterPro:SANT/MybPANTHER:PTHR31314PANTHER:PTHR31314:SF6
PFAM:PF00249SEG:segSUPFAM:SSF46689TIGRFAMs:TIGR01557MapMan:35.1:
Description
No Description!
Coordinates
chr6D:+:332802967..332805944
Molecular Weight (calculated)
33435.9 Da
IEP (calculated)
10.031
GRAVY (calculated)
-0.578
Length
304 amino acids
Sequence
(BLAST)
001: MARKQGAAWR RSGFVRQYTR SSVPRMRWTA ELESSFVGAV ERLGGRDSAK VTPKRILELM DVRGLTISHV KSHLQMYRCT PHDNGKKETQ PQLGLKNHPF
101: ATDERGSEGL TFPPMKRAKA GAEVAASCKS MQGNSGMRMM IPGNRCCIDD YVQLQAMSMD RMRRSVNEGL RRHSAAAASL QELRPWVQGP EASKDSKPGA
201: VRRLNHTARQ LPSMERYESG CFLFSSATSG ECEPAAYLGA NQRSPSPWFA MEQRAVKDVS SWPSQSSCAL SPSSRSFSDC SGPPDCSFAG QGINLELSLS
301: IPGL
Best Arabidopsis Sequence Match ( AT4G04605.1 )
(BLAST)
001: MKNPIVRSYV RSKVPRLRWN SDLHNSFVQA VEQLGGENRA TPKMVLQLMD VRGLTISHVK SHLQMYRGMK LEESMQEEIL AKRSVRVTGQ VTWWQFQHYL
101: HNYQRLQGNA NFFQNQQRQE AGIYEKIITF GQSSNETKEV PSDYFTCKSL YETSRAPQNK TRDDDENGEA VVAIEDDGNV VDEHDDEDAN DDEVTLSLNS
201: IKVSKSEEEL SLELTLGLKA
Arabidopsis Description
Myb-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B8R6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.