Factsheet for HORVU6Hr1G064920.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G016420.1	Barley	mitochondrion	99.58	99.58
TraesCS6D01G236000.1	Wheat	mitochondrion	64.41	50.0
TraesCS6B01G270800.1	Wheat	nucleus	66.1	49.06
TraesCS6A01G254700.1	Wheat	nucleus	60.17	46.86
HORVU7Hr1G107500.1	Barley	mitochondrion	11.02	34.67
HORVU7Hr1G107680.8	Barley	nucleus	20.76	18.77
HORVU2Hr1G095530.2	Barley	nucleus	23.31	18.33
HORVU7Hr1G107670.1	Barley	nucleus	19.07	18.15
HORVU1Hr1G052170.2	Barley	nucleus	19.07	17.58
KXG31083	Sorghum	nucleus	23.31	17.19
Zm00001d017563_P002	Maize	nucleus	23.31	15.9
HORVU7Hr1G070420.2	Barley	nucleus	11.02	15.57
HORVU7Hr1G107630.5	Barley	mitochondrion	15.68	13.65
HORVU5Hr1G017410.10	Barley	nucleus	19.07	13.08
HORVU4Hr1G082560.1	Barley	plastid	20.34	12.57
HORVU6Hr1G000410.1	Barley	nucleus	17.37	12.46
HORVU4Hr1G012040.5	Barley	nucleus	19.49	12.33
HORVU5Hr1G097900.4	Barley	mitochondrion, plastid	17.37	10.68
HORVU6Hr1G019650.5	Barley	nucleus	19.92	9.79
HORVU5Hr1G060310.22	Barley	nucleus	17.37	9.23
HORVU7Hr1G080530.3	Barley	nucleus	19.92	9.2

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	UniProt:A0A287UG85	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU6Hr1G064920	EnsemblPlants:HORVU6Hr1G064920.1	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31314
PANTHER:PTHR31314:SF2	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B488212	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:444575627..444576907

Molecular Weight (calculated)

26287.8 Da

IEP (calculated)

11.525

GRAVY (calculated)

-0.570

Length

236 amino acids

Sequence
(BLAST)

001: MAKKQEAWRR GGFVRRYTRS SVPRMRWTAE LESGFVRAVD RLGSRDSAKV TPKRILELMD VQGLTISHVK SHLQMYRCTP HGNKGKQGGG GAKNPCAFLP
101: AEMQPQLGLK NHPFATDERG SEGLTFPPMK RFFAPTRLRA KLLDFHVKKQ ALITHFGRPF FSLSLFSGSR VDRSKAGAET AASCKSMQGN SDTRVMIPGN
201: RRCIDDYLQQ HAMSSVGRMR NVNEGLRRHS AAAAAA

Best Arabidopsis Sequence Match ( AT2G40260.1 )
(BLAST)

001: MRSSSQNSEN SKTCLSNNIK ATTKNEEDKD EEDDEEGEED EEERSGDQSP SSNSYEEESG SHHHDQNKKN GGSVRPYNRS KTPRLRWTPE LHICFLQAVE
101: RLGGPDRATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTD EPNEGDQGFS FEHGAGYTYN LSQLPMLQSF DQRPSSSLGY GGGSWTDHRR QIYRSPWRGL
201: TTRENTRTRQ TMFSSQPGER YHGVSNSILN DKNKTISFRI NSHEGVHDNN GVAGAVPRIH RSFLEGMKTF NKSWGQSLSS NLKSSTATIP QDHIATTLNS
301: YQWENAGVAE GSENVLKRKR LLFSDDCNKS DQDLDLSLSL KVPRTHDNLG ECLLEDEVKE HDDHQDIKSL SLSLSSSGSS KLDRTIRKED QTDHKKRKIS
401: VLASPLDLTL

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.